RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GPR32O75388 356 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 CCNE2O96020 404 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 EPCAMP16422 314 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 AOC1P19801 751 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 RFX1P22670 979 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 NLRP11P59045 1033 aaKnown RBP21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 TMC5Q6UXY8 1006 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 CABP7Q86V35 215 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 CCDC105Q8IYK2 499 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 TMTC2Q8N394 836 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 DTWD2Q8NBA8 298 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 AUTS2Q8WXX7 1259 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 SCLT1Q96NL6 688 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 RTP3Q9BQQ7 232 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 TCEAL9Q9UHQ7 104 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 MYH9P35579 1960 aaKnown RBP21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 ZNF292O60281 2723 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 C22orf31O95567 290 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 IGHDP01880 384 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 CALM1P0DP23 149 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 CALM2P0DP24 149 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 CALM3P0DP25 149 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 NAPAP54920 295 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 BCAR1P56945 870 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 TDGQ13569 410 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 CLLU1OSQ5K130 101 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 SIX5Q8N196 739 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 MAP7D2Q96T17 732 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 HINFPQ9BQA5 517 aa21.54■■□□□ 1.04
NCKIPSD-209ENST00000470006 ZBTB42B2RXF5 422 aa21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 FOSP01100 380 aaPredicted RBP21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 CLCN3P51790 818 aa21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 OTOP3Q7RTS5 596 aa21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 DGLUCYQ7Z3D6 616 aa21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 BBXQ8WY36 941 aaPredicted RBP21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 ZNF668Q96K58 619 aaPredicted RBP21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 MRPL9Q9BYD2 267 aaKnown RBP21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 ANO3Q9BYT9 981 aa21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 SLC12A7Q9Y666 1083 aa21.53■■□□□ 1.04
NCKIPSD-209ENST00000470006 MEIS1O00470 390 aa21.52■■□□□ 1.04
NCKIPSD-209ENST00000470006 ZC3H11AO75152 810 aaKnown RBP eCLIP21.52■■□□□ 1.04
NCKIPSD-209ENST00000470006 NPR3P17342 541 aa21.52■■□□□ 1.04
NCKIPSD-209ENST00000470006 TMOD1P28289 359 aa21.52■■□□□ 1.04
NCKIPSD-209ENST00000470006 CCDC149Q6ZUS6 474 aa21.52■■□□□ 1.04
NCKIPSD-209ENST00000470006 KIAA2013Q8IYS2 634 aa21.52■■□□□ 1.04
NCKIPSD-209ENST00000470006 CEP131Q9UPN4 1083 aa21.52■■□□□ 1.04
NCKIPSD-209ENST00000470006 LMNAP02545 664 aaKnown RBP21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 ATP4AP20648 1035 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 EIF4BP23588 611 aaKnown RBP21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 MCM5P33992 734 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 ADCY7P51828 1080 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 GIT2Q14161 759 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 EFCAB12Q6NXP0 572 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 PLA2G4DQ86XP0 818 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 RMDN1Q96DB5 314 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 ZBP1Q9H171 429 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 RIC8AQ9NPQ8 531 aa21.51■■□□□ 1.03
NCKIPSD-209ENST00000470006 MED19A0JLT2 244 aaPredicted RBP21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 SH2B2O14492 632 aaPredicted RBP21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 MAGEB2O15479 319 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 AAMPQ13685 434 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 WWC2Q6AWC2 1192 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 TMTC3Q6ZXV5 915 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 LRRC71Q8N4P6 559 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 FANCBQ8NB91 859 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 TMEM87BQ96K49 555 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 KCNK12Q9HB15 430 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 DUSP12Q9UNI6 340 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 DMXL1Q9Y485 3027 aa21.5■■□□□ 1.03
NCKIPSD-209ENST00000470006 A0A0U1RQF3 1178 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 FGFR4P22455 802 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 CHMLP26374 656 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 PPFIBP1Q86W92 1011 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 MICU3Q86XE3 530 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 SLC22A17Q8WUG5 538 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 ZNF577Q9BSK1 485 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 MTA3Q9BTC8 594 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 ADAMTS10Q9H324 1103 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 SEMA4AQ9H3S1 761 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 SFXN1Q9H9B4 322 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 DACT1Q9NYF0 836 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 SAMM50Q9Y512 469 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 R4GN57 208 aa21.49■■□□□ 1.03
NCKIPSD-209ENST00000470006 SMCO2A6NFE2 343 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 IPO5O00410 1097 aaKnown RBP21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 PSAPP07602 524 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 CTSAP10619 480 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 POLGP54098 1239 aaPredicted RBP21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 LONRF3Q496Y0 759 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 TTC22Q5TAA0 569 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 SYNE3Q6ZMZ3 975 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 NIPA1Q7RTP0 329 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 GPR149Q86SP6 731 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 FEZF2Q8TBJ5 459 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 NLRP7Q8WX94 980 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 GABBR1Q9UBS5 961 aa21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 MAFBQ9Y5Q3 323 aaPredicted RBP21.48■■□□□ 1.03
NCKIPSD-209ENST00000470006 CFHP08603 1231 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 GSPT1P15170 499 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms