RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ASAP2O43150 1006 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 USO1O60763 962 aaKnown RBP14.08□□□□□ -0.16
TRAF4-208ENST00000469529 RSPH10BP0C881 870 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 RARBP10826 455 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
TRAF4-208ENST00000469529 INSRRP14616 1297 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 ZNF18P17022 549 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 SMTNP53814 917 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 NCKAP1LP55160 1127 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 TPM4P67936 248 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 EMC2Q15006 297 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 NFIL3Q16649 462 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 MTERF2Q49AM1 385 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 ZCWPW2Q504Y3 356 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 ODR4Q5SWX8 454 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 TTI2Q6NXR4 508 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 FAM178BQ8IXR5 827 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 SMYD4Q8IYR2 804 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-208ENST00000469529 ZNF710Q8N1W2 664 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 KLHDC9Q8NEP7 349 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 NELFBQ8WX92 580 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 HVCN1Q96D96 273 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 MRPL44Q9H9J2 332 aaKnown RBP14.08□□□□□ -0.16
TRAF4-208ENST00000469529 CGNQ9P2M7 1197 aaKnown RBP14.08□□□□□ -0.16
TRAF4-208ENST00000469529 TRAF3IP3Q9Y228 551 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 ZEB2O60315 1214 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 ADAMTS4O75173 837 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 MYCP01106 439 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-208ENST00000469529 HOXC8P31273 242 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 GRK4P32298 578 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 HOXD13P35453 343 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 POLGP54098 1239 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-208ENST00000469529 CDC42EP1Q00587 391 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 CACNB1Q02641 598 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-208ENST00000469529 RAD51AP2Q09MP3 1159 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 TBC1D8BQ0IIM8 1120 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 MYBPC2Q14324 1141 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 MXD4Q14582 209 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-208ENST00000469529 PPP2R5AQ15172 486 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 KNOP1Q1ED39 458 aaKnown RBP14.07□□□□□ -0.16
TRAF4-208ENST00000469529 EDRF1Q3B7T1 1238 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 FAM102BQ5T8I3 360 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 CCSAPQ6IQ19 270 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-208ENST00000469529 TRIM50Q86XT4 487 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 ZC3H3Q8IXZ2 948 aaKnown RBP14.07□□□□□ -0.16
TRAF4-208ENST00000469529 AOPEPQ8N6M6 819 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 LINC01465Q8N7H1 131 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 HPS3Q969F9 1004 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 KATNAL1Q9BW62 490 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 KCTD10Q9H3F6 313 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 SEMA6BQ9H3T3 888 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 NRCAMQ92823 1304 aa14.07□□□□□ -0.16
TRAF4-208ENST00000469529 KIAA0100Q14667 2235 aaKnown RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 MBLAC1A4D2B0 266 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 C22orf31O95567 290 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 FGFR1OPO95684 399 aaKnown RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 ELNP15502 786 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 EN2P19622 333 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 PTGS1P23219 599 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 NPTX2P47972 431 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 DNM2P50570 870 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 MCCD1P59942 119 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 ADAM17P78536 824 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 PURAQ00577 322 aaKnown RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 TRIM32Q13049 653 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 CDKAL1Q5VV42 579 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 RETREG2Q8NC44 543 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 TMEM161BQ8NDZ6 487 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 IFT74Q96LB3 600 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 DUSP9Q99956 384 aaKnown RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 SH2D3AQ9BRG2 576 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 TSEN34Q9BSV6 310 aaKnown RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 THAP9Q9H5L6 903 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 TMEM206Q9H813 350 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 FANCLQ9NW38 375 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 ARHGAP28Q9P2N2 729 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 DDX20Q9UHI6 824 aaKnown RBP14.06□□□□□ -0.16
TRAF4-208ENST00000469529 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 NFE2L3Q9Y4A8 694 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 PHLPP2Q6ZVD8 1323 aa14.06□□□□□ -0.16
TRAF4-208ENST00000469529 CABYRO75952 493 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 CCND3P30281 292 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-208ENST00000469529 NAMPTP43490 491 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 CASP5P51878 434 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 PMS1P54277 932 aaKnown RBP14.05□□□□□ -0.16
TRAF4-208ENST00000469529 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
TRAF4-208ENST00000469529 SPAG1Q07617 926 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 DMP1Q13316 513 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-208ENST00000469529 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-208ENST00000469529 LRRC41Q15345 812 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 GNASQ5JWF2 1037 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 ANKRD40Q6AI12 368 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 HAUS6Q7Z4H7 955 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 C12orf56Q8IXR9 622 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 PCSK9Q8NBP7 692 aaKnown RBP14.05□□□□□ -0.16
TRAF4-208ENST00000469529 GOLGA5Q8TBA6 731 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 MTG1Q9BT17 334 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-208ENST00000469529 NFKBIZQ9BYH8 718 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms