RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 LMBR1Q8WVP7 490 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 CHMP6Q96FZ7 201 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 THAP2Q9H0W7 228 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 AZI2Q9H6S1 392 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 SEPT11Q9NVA2 429 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 CHORDC1Q9UHD1 332 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 THRAP3Q9Y2W1 955 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 MYO3BQ8WXR4 1341 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 PDXKO00764 312 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 MMEP08473 750 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 SHMT1P34896 483 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 MARCKSL1P49006 195 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 PTENP60484 403 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 PPATQ06203 517 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 KLRC3Q07444 240 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 PLS1Q14651 629 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 ZDHHC24Q6UX98 284 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 SYT2Q8N9I0 419 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 GPR88Q9GZN0 384 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 TYW1Q9NV66 732 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 SPATA31A5Q5VU36 1347 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 SPATA31A7Q8IWB4 1347 aa12.73□□□□□ -0.37
PDZRN3-203ENST00000462146 FAM196BA6NMK8 535 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 IL1R1P14778 569 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 NMT1P30419 496 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 DRAP1Q14919 205 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 LACTB2Q53H82 288 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 CYP2W1Q8TAV3 490 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 ATXN2LQ8WWM7 1075 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 ZNF317Q96PQ6 595 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 FAM86B1E9PN63 330 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 MEIS2O14770 477 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 FAM86B2P0C5J1 330 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 SOX5P35711 763 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 STAT1P42224 750 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 SLCO1A2P46721 670 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 PMS2P54278 862 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 SLC29A2Q14542 456 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 CBWD6Q4V339 395 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 CBWD3Q5JTY5 395 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 CBWD5Q5RIA9 395 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 WLSQ5T9L3 541 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 GIMAP7Q8NHV1 300 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 RFFLQ8WZ73 363 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 LENG9Q96B70 501 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 DNAJC12Q9UKB3 198 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 DNM3Q9UQ16 869 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 DAAM1Q9Y4D1 1078 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 GREB1LQ9C091 1923 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 NCANO14594 1321 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 MYH11P35749 1972 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 ZBTB39O15060 712 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 KRT13P13646 458 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 FERP16591 822 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 ARHGAP4P98171 946 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 XRCC4Q13426 336 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 NEDD9Q14511 834 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 JAMLQ86YT9 394 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 ZDHHC14Q8IZN3 488 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 EPS8L3Q8TE67 593 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 PIGOQ8TEQ8 1089 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 N4BP2L2Q92802 583 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 BORCS6Q96GS4 357 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 GGT7Q9UJ14 662 aa12.72□□□□□ -0.37
PDZRN3-203ENST00000462146 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 LRRN2O75325 713 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 TRIM37O94972 964 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 FGFR4P22455 802 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 IFNAR2P48551 515 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 NPEPPSP55786 919 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 GTF2IP78347 998 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 CCDC38Q502W7 563 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 KRT35Q92764 455 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 C8orf37Q96NL8 207 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 PRMT1Q99873 361 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 RAB17Q9H0T7 212 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 ODF2LQ9ULJ1 636 aa12.71□□□□□ -0.37
PDZRN3-203ENST00000462146 TMEM110-MUSTN1A8MSY1 372 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms