RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CCDC62Q6P9F0 684 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 ZNF761Q86XN6 746 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 WDR48Q8TAF3 677 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 RPGRQ92834 1020 aaKnown RBP6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 FERMT2Q96AC1 680 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 AJUBAQ96IF1 538 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 KATNBL1Q9H079 304 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 MTG2Q9H4K7 406 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 ZCCHC4Q9H5U6 513 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 KCMF1Q9P0J7 381 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 FTSJ1Q9UET6 329 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 Q9UFV3 132 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 CDC42EP3Q9UKI2 254 aa6.17□□□□□ -1.42
HMGB3P6-201ENST00000444896 A0A0A6YYK5 440 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 OPHN1O60890 802 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 SASH1O94885 1247 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDH8O95206 1070 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 CELA3BP08861 270 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 ENPP1P22413 925 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 UGT8Q16880 541 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 FAM26FQ5R3K3 315 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 TRIM68Q6AZZ1 485 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 Q6ZUG5 572 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 KCNK18Q7Z418 384 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 SIAH1Q8IUQ4 282 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 C1orf162Q8NEQ5 155 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 OR5AN1Q8NGI8 311 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 MBD6Q96DN6 1003 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 SOX7Q9BT81 388 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 TMEM168Q9H0V1 697 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 WNT8AQ9H1J5 351 aa6.16□□□□□ -1.42
HMGB3P6-201ENST00000444896 TRIM75PA6NK02 468 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDHGA12O60330 932 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 CUTAO60888 179 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 MT-CO1P00395 513 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 CSF2RBP32927 897 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 KCNQ1P51787 676 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 DGKDQ16760 1214 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 ABCB5Q2M3G0 1257 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 LARP4Q71RC2 724 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 OTOP2Q7RTS6 562 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 BMP8AQ7Z5Y6 402 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 FUBP3Q96I24 572 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 FAXDC2Q96IV6 333 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 SMAD5Q99717 465 aaKnown RBP6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 NOL10Q9BSC4 688 aaKnown RBP6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 CCM2LQ9NUG4 571 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PRSS50Q9UI38 385 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 FBXO10Q9UK96 956 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 EDARQ9UNE0 448 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDHGA7Q9Y5G6 932 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDHGA6Q9Y5G7 932 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDHGA3Q9Y5H0 932 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 PCDHGA2Q9Y5H1 932 aa6.15□□□□□ -1.42
HMGB3P6-201ENST00000444896 WASHC2AQ641Q2 1341 aa6.15□□□□□ -1.43
HMGB3P6-201ENST00000444896 CYP1A1P04798 512 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 MYBL2P10244 700 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 RBP3P10745 1247 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 ETV4P43268 484 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 STAT5BP51692 787 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 LGALS4P56470 323 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 PCBP2Q15366 365 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 RGL3Q3MIN7 710 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 SP8Q8IXZ3 490 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 KLHL36Q8N4N3 616 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 PPP1R14CQ8TAE6 165 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 NKD2Q969F2 451 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 KCTD10Q9H3F6 313 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 ADAM29Q9UKF5 820 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 USP18Q9UMW8 372 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 PTPN22Q9Y2R2 807 aa6.14□□□□□ -1.43
HMGB3P6-201ENST00000444896 ST20-MTHFSA0A0A6YYL1 179 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 NOBOXO60393 691 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 TRIM13O60858 407 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 ALDH1L1O75891 902 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 ZNF888P0CJ79 500 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 MTNR1BP49286 362 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 SRSF2Q01130 221 aaKnown RBP6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 MAP3K12Q12852 859 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 TOR2AQ5JU69 321 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 PGM2L1Q6PCE3 622 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 GAREM2Q75VX8 874 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 CDYL2Q8N8U2 506 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 GAB3Q8WWW8 586 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 QRSL1Q9H0R6 528 aaKnown RBP6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 SAE1Q9UBE0 346 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 EVLQ9UI08 416 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 THRAP3Q9Y2W1 955 aaKnown RBP6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 SPEF1Q9Y4P9 236 aa6.13□□□□□ -1.43
HMGB3P6-201ENST00000444896 PCDHB6Q9Y5E3 794 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms