RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 PHKA2P46019 1235 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.23
LTBR-204ENST00000444814 GPC3P51654 580 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 NPEPPSP55786 919 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 WDR5P61964 334 aaKnown RBP13.62□□□□□ -0.23
LTBR-204ENST00000444814 MBTPS1Q14703 1052 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 STK38Q15208 465 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 KIZQ2M2Z5 673 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 RHPN2Q8IUC4 686 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 LINC01465Q8N7H1 131 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 SLC28A3Q9HAS3 691 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 TLL1O43897 1013 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 MED24O75448 989 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 CLSTN1O94985 981 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 SPATA31C1P0DKV0 1188 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 SKIP12755 728 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 SRGAP1Q7Z6B7 1085 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 HERC6Q8IVU3 1022 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 MYOCDQ8IZQ8 938 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 SPRYD3Q8NCJ5 442 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 TIFAQ96CG3 184 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 OSMRQ99650 979 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
LTBR-204ENST00000444814 KCND2Q9NZV8 630 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 CXXC1Q9P0U4 656 aaPredicted RBP13.62□□□□□ -0.23
LTBR-204ENST00000444814 WRAP73Q9P2S5 460 aaPredicted RBP13.62□□□□□ -0.23
LTBR-204ENST00000444814 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 PADI3Q9ULW8 664 aa13.62□□□□□ -0.23
LTBR-204ENST00000444814 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.62□□□□□ -0.23
LTBR-204ENST00000444814 TNRC18O15417 2968 aaPredicted RBP13.61□□□□□ -0.23
LTBR-204ENST00000444814 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
LTBR-204ENST00000444814 GPR32O75388 356 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 EYA4O95677 639 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 F13A1P00488 732 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 DARSP14868 501 aaKnown RBP13.61□□□□□ -0.23
LTBR-204ENST00000444814 DNAJB2P25686 324 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 CD52P31358 61 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
LTBR-204ENST00000444814 POU5F1BQ06416 359 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 GPNMBQ14956 572 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 ZRSR1Q15695 479 aaKnown RBP13.61□□□□□ -0.23
LTBR-204ENST00000444814 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 CABP7Q86V35 215 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 KRI1Q8N9T8 703 aaKnown RBP13.61□□□□□ -0.23
LTBR-204ENST00000444814 RSPH1Q8WYR4 309 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 KIFAP3Q92845 792 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 ZBTB10Q96DT7 871 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 IFT74Q96LB3 600 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 NLRP4Q96MN2 994 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 RAD9AQ99638 391 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 CHST12Q9NRB3 414 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 INSL6Q9Y581 213 aa13.61□□□□□ -0.23
LTBR-204ENST00000444814 TMEM150BA6NC51 233 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 HOXA2O43364 376 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 YEATS4O95619 227 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 SLC39A14Q15043 492 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 HYIQ5T013 277 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 PADI6Q6TGC4 694 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 KCNG4Q8TDN1 519 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 TMEM143Q96AN5 459 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 CEP89Q96ST8 783 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 SH2D3AQ9BRG2 576 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 C2orf40Q9H1Z8 148 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 BHMT2Q9H2M3 363 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 ADAMTS10Q9H324 1103 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 ST3GAL5Q9UNP4 418 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 SRPRBQ9Y5M8 271 aaKnown RBP13.6□□□□□ -0.23
LTBR-204ENST00000444814 CEP290O15078 2479 aa13.6□□□□□ -0.23
LTBR-204ENST00000444814 ERLIN2O94905 339 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 CYP11B2P19099 503 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 NASPP49321 788 aaPredicted RBP13.59□□□□□ -0.23
LTBR-204ENST00000444814 NUCB2P80303 420 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 CEBPZQ03701 1054 aaKnown RBP13.59□□□□□ -0.23
LTBR-204ENST00000444814 LAMTOR4Q0VGL1 99 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 CATSPER4Q7RTX7 472 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 NPAS4Q8IUM7 802 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 PRPF31Q8WWY3 499 aaKnown RBP13.59□□□□□ -0.23
LTBR-204ENST00000444814 PPP1R16BQ96T49 567 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 YME1L1Q96TA2 773 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
LTBR-204ENST00000444814 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 NOC2LQ9Y3T9 749 aaKnown RBP13.59□□□□□ -0.23
LTBR-204ENST00000444814 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
LTBR-204ENST00000444814 TRIP12Q14669 1992 aaPredicted RBP13.59□□□□□ -0.23
LTBR-204ENST00000444814 A0A087WZ62 844 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 PPP6R2O75170 966 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 GJB5O95377 273 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 SRGAP2CP0DJJ0 459 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 AXLP30530 894 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 RAB27AP51159 221 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 APBB1IPQ7Z5R6 666 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms