RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CUL4AQ13619 759 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 IKBKEQ14164 716 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 CSPP1Q1MSJ5 1256 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 FOXD4L5Q5VV16 416 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 IER5Q5VY09 327 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 PLA2G4FQ68DD2 849 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 TAF2Q6P1X5 1199 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 B3GNT9Q6UX72 402 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 KIAA0319LQ8IZA0 1049 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 LRRC71Q8N4P6 559 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 FOXD4L4Q8WXT5 416 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 MTMR9Q96QG7 549 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 CELF4Q9BZC1 486 aaKnown RBP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 WRAP73Q9P2S5 460 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 PCDHB3Q9Y5E6 796 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 CDY2AQ9Y6F7 541 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 TET1Q8NFU7 2136 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 TANC1Q9C0D5 1861 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 SIP14410 1827 aa6.46□□□□□ -1.37
HMGB3P24-201ENST00000433260 SMIM35A0A1B0GVV1 85 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 NR1I2O75469 434 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 C22orf31O95567 290 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 VTNP04004 478 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 HSP90AA1P07900 732 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 PFKMP08237 780 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 GHRP10912 638 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 SYT1P21579 422 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 CDC25AP30304 524 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 CD52P31358 61 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 KCNJ6P48051 423 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 CLCN3P51790 818 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 PTPN5P54829 565 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 NLRP11P59045 1033 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 DEFB103AP81534 67 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 MRPS6P82932 125 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 RBL2Q08999 1139 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 TBC1D8BQ0IIM8 1120 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 NFX1Q12986 1120 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 LPIN1Q14693 890 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 ZRSR1Q15695 479 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 TMEM266Q2M3C6 531 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 XKR9Q5GH70 373 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 XKR3Q5GH77 459 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 FAM26DQ5JW98 314 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 RASIP1Q5U651 963 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 FAM173BQ6P4H8 233 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 CNKSR3Q6P9H4 555 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 ANO5Q75V66 913 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 HSCBQ8IWL3 235 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 NME8Q8N427 588 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 DEFB123Q8N688 67 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 C4orf32Q8N8J7 132 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 RDM1Q8NG50 284 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 SEPT8Q92599 483 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 FAM167AQ96KS9 214 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 CEP170P1Q96L14 293 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 EIF2AK1Q9BQI3 630 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 NIFKQ9BYG3 293 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 PBX4Q9BYU1 374 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 MTIF3Q9H2K0 278 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 NKX2-4Q9H2Z4 354 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 AGO3Q9H9G7 860 aaKnown RBP6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 CERS4Q9HA82 394 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 LRWD1Q9UFC0 647 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 LIMD1Q9UGP4 676 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 CEP131Q9UPN4 1083 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 AKT3Q9Y243 479 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 TRPV2Q9Y5S1 764 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 PTPRSQ13332 1948 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 IGSF9BQ9UPX0 1349 aa6.46□□□□□ -1.38
HMGB3P24-201ENST00000433260 COL1A2P08123 1366 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 ABHD14A-ACY1A0A1B0GW23 586 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 ENPP3O14638 875 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 MAGEB2O15479 319 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 DKC1O60832 514 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 MED24O75448 989 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 CSDE1O75534 798 aaKnown RBP6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 PARNO95453 639 aaKnown RBP6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 CXCL10P02778 98 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 OR52Z1P0C646 297 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 SRGAP2CP0DJJ0 459 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 ATP2A2P16615 1042 aaKnown RBP6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 TMOD1P28289 359 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 YWHABP31946 246 aaKnown RBP6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 TRAPPC10P48553 1259 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 DNM2P50570 870 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 SMAD3P84022 425 aaKnown RBP6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 CEBPZQ03701 1054 aaKnown RBP6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 MGAT3Q09327 533 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 DRP2Q13474 957 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 IL17AQ16552 155 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 KIZQ2M2Z5 673 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 TMEM259Q4ZIN3 620 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 PLEKHG4Q58EX7 1191 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 RILPL1Q5EBL4 403 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 FBXO47Q5MNV8 452 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 ZNF697Q5TEC3 545 aa6.45□□□□□ -1.38
HMGB3P24-201ENST00000433260 DTHD1Q6ZMT9 781 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms