RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RFPL3O75679 317 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 JMJD7P0C870 316 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 COMTP21964 271 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 SLC6A3Q01959 620 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 MAP3K12Q12852 859 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 PABPC4Q13310 644 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 CFAP100Q494V2 611 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 SPDYAQ5MJ70 313 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 OR14K1Q8NGZ2 314 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 CFHR4Q92496 578 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 ADOQ96SZ5 270 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 PLA2G12BQ9BX93 195 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 PCIF1Q9H4Z3 704 aa7.13□□□□□ -1.27
HMGB3P5-201ENST00000428894 ADCY10Q96PN6 1610 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 ADGRL1O94910 1474 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 CBX4O00257 560 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 ROM1Q03395 351 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 PRKD1Q15139 912 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 ZNF174Q15697 407 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 POLNQ7Z5Q5 900 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 KIAA1958Q8N8K9 716 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 RNPC3Q96LT9 517 aaKnown RBP7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 B4GALT6Q9UBX8 382 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 MAGEL2Q9UJ55 1249 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
HMGB3P5-201ENST00000428894 MAFO75444 373 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 PRLP01236 227 aa7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 CYP17A1P05093 508 aa7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 RPS19P39019 145 aaKnown RBP7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 RGS3P49796 1198 aa7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 DUSP8Q13202 625 aa7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 C21orf62-AS1Q17RA5 79 aa7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 BCL6BQ8N143 479 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 MAML3Q96JK9 1138 aa7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 MAGEC2Q9UBF1 373 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 SLC30A1Q9Y6M5 507 aa7.11□□□□□ -1.27
HMGB3P5-201ENST00000428894 UBA6A0AVT1 1052 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 AMHP03971 560 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 ACO1P21399 889 aaKnown RBP7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 HGFACQ04756 655 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 ADAM15Q13444 863 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 TCEA2Q15560 299 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 TTC38Q5R3I4 469 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 Q6ZSN1 163 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 SYNPOQ8N3V7 929 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 EDAQ92838 391 aa7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 SAE1Q9UBE0 346 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P5-201ENST00000428894 TOP2BQ02880 1626 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 FSHBP01225 129 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 SLC9A1P19634 815 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 PTX3P26022 381 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 SLFN12LQ6IEE8 588 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 HOMER1Q86YM7 354 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 TUBGCP5Q96RT8 1024 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 ZNF747Q9BV97 191 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 VPS11Q9H270 941 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 MSL2Q9HCI7 577 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 VWA7Q9Y334 891 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 CD2APQ9Y5K6 639 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 PLB1Q6P1J6 1458 aa7.09□□□□□ -1.27
HMGB3P5-201ENST00000428894 PTPRGP23470 1445 aa7.09□□□□□ -1.28
HMGB3P5-201ENST00000428894 BIVM-ERCC5R4GMW8 1640 aa7.09□□□□□ -1.28
HMGB3P5-201ENST00000428894 GLI2P10070 1586 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 RUSC2Q8N2Y8 1516 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 KIAA0586Q9BVV6 1533 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 C6P13671 934 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 TACR2P21452 398 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 ANTXR2P58335 489 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 KLHDC10Q6PID8 442 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 CRIP3Q6Q6R5 217 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 NME9Q86XW9 330 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 GPR135Q8IZ08 494 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 FAM89AQ96GI7 184 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 ELF4Q99607 663 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 NELFAQ9H3P2 528 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 INTS7Q9NVH2 962 aaKnown RBP7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 ZKSCAN5Q9Y2L8 839 aa7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 CTDP1Q9Y5B0 961 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P5-201ENST00000428894 TEX14Q8IWB6 1497 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 SLC26A4O43511 780 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 AKAP8O43823 692 aaKnown RBP7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 H2AFYO75367 372 aaKnown RBP7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 MSX2P35548 267 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 NEK4P51957 841 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 SESN2P58004 480 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 FOXL1Q12952 345 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 EPHA7Q15375 998 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 DGKDQ16760 1214 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 PRAMEF9Q5VWM5 478 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 MAMDC4Q6UXC1 1216 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 OR5AN1Q8NGI8 311 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 APPBP2Q92624 585 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 FANCLQ9NW38 375 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 OXSMQ9NWU1 459 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 PLA2G3Q9NZ20 509 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 DENND2AQ9ULE3 1009 aa7.07□□□□□ -1.28
HMGB3P5-201ENST00000428894 KPNA6O60684 536 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms