RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	ADH1C	P00326	375 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	FGR	P09769	529 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	SP9	P0CG40	484 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	SCG2	P13521	617 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	GLUL	P15104	373 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	MARK3	P27448	753 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	HSD17B4	P51659	736 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	HAND2	P61296	217 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	IGBP1	P78318	339 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	MRPS9	P82933	396 aa	Known RBP	10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	SLC35G1	Q2M3R5	365 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	ZMYM1	Q5SVZ6	1142 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	LRRC55	Q6ZSA7	311 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	TSHZ1	Q6ZSZ6	1077 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	THNSL1	Q8IYQ7	743 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	TRAPPC12	Q8WVT3	735 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	AUTS2	Q8WXX7	1259 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	RUBCN	Q92622	972 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	TCF25	Q9BQ70	676 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	ADAM7	Q9H2U9	754 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	JMJD4	Q9H9V9	463 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	ECHDC1	Q9NTX5	307 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	RTEL1	Q9NZ71	1219 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	ZFYVE26	Q68DK2	2539 aa		10.05	□□□□□ -0.8
NIF3L1-206	ENST00000416651	KAT6A	Q92794	2004 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	MYH6	P13533	1939 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	N4BP1	O75113	896 aa	Known RBP	10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	CLASP2	O75122	1294 aa	Known RBP	10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	SLC3A2	P08195	630 aa	Known RBP	10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	HSPD1	P10809	573 aa	Known RBP	10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	FGFR1	P11362	822 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	EPCAM	P16422	314 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	ZDHHC14	Q8IZN3	488 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	RASGRP4	Q8TDF6	673 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	CDCA3	Q99618	268 aa	Predicted RBP	10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	NACAP1	Q9BZK3	213 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	ENTPD7	Q9NQZ7	604 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	RNF19A	Q9NV58	838 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	DLGAP2	Q9P1A6	1054 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	CA14	Q9ULX7	337 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	PCDHB15	Q9Y5E8	787 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	DENND4A	Q7Z401	1863 aa		10.04	□□□□□ -0.8
NIF3L1-206	ENST00000416651	TGM1	P22735	817 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	GSK3A	P49840	483 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	MRPS6	P82932	125 aa	Known RBP	10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	STOX1	Q6ZVD7	989 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	FCHSD1	Q86WN1	690 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	TBC1D10C	Q8IV04	446 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	STAG2	Q8N3U4	1231 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	TDRD5	Q8NAT2	981 aa	Known RBP	10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	MRPS27	Q92552	414 aa	Known RBP	10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	KCNK12	Q9HB15	430 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	PARD6A	Q9NPB6	346 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	TCP11L1	Q9NUJ3	509 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	ANAPC4	Q9UJX5	808 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	FBXL21	Q9UKT6	434 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	PCDHB12	Q9Y5F1	795 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	CCDC171	Q6TFL3	1326 aa		10.03	□□□□□ -0.8
NIF3L1-206	ENST00000416651	C2orf71	A6NGG8	1288 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	NT5C1B-RDH14	C9J2C7	533 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	CFAP99	D6REC4	459 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	NOP56	O00567	594 aa	Known RBP	10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	MAN1A2	O60476	641 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	ATP9A	O75110	1047 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	EOMES	O95936	686 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	ADRB1	P08588	477 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	HOXB8	P17481	243 aa	Predicted RBP	10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	UBE3A	Q05086	875 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	PPFIA1	Q13136	1202 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	TDG	Q13569	410 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	GRIK4	Q16099	956 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	TMC5	Q6UXY8	1006 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	TMEM40	Q8WWA1	233 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	CHAMP1	Q96JM3	812 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	RTP3	Q9BQQ7	232 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	KLF16	Q9BXK1	252 aa	Predicted RBP	10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	USP26	Q9BXU7	913 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	ZBTB40	Q9NUA8	1239 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	TUBE1	Q9UJT0	475 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	DBR1	Q9UK59	544 aa	Known RBP	10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	LRFN2	Q9ULH4	789 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	DUSP12	Q9UNI6	340 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	MRPL11	Q9Y3B7	192 aa	Known RBP	10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	C2orf16	Q68DN1	1984 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	FRY	Q5TBA9	3013 aa		10.02	□□□□□ -0.81
NIF3L1-206	ENST00000416651	FAM208B	Q5VWN6	2430 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	GSTTP1	A0A1W2PQM5	241 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	SPATA31C2	B4DYI2	1134 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	FGA	P02671	866 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	ZFY	P08048	801 aa	Predicted RBP	10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	GNAT1	P11488	350 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	SARS	P49591	514 aa	Known RBP	10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	TUSC1	Q2TAM9	212 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	CES5A	Q6NT32	575 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	METTL7B	Q6UX53	244 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	TMC7	Q7Z402	723 aa		10.01	□□□□□ -0.81
NIF3L1-206	ENST00000416651	MCF2L2	Q86YR7	1114 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms