RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 DHX33Q9H6R0 707 aaKnown RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 POLD4Q9HCU8 107 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 GPRC5CQ9NQ84 441 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 DDX19AQ9NUU7 478 aaKnown RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 KIAA1024Q9UPX6 916 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 CEP290O15078 2479 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 A0A087WZ62 844 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 A0A1W2PPC1 479 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 M0QZ92 97 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 CSDE1O75534 798 aaKnown RBP8.6□□□□□ -1.03
CPSF4-202ENST00000412686 BMP15O95972 392 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 PFKMP08237 780 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 FGFR4P22455 802 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 PBX2P40425 430 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 NASPP49321 788 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-202ENST00000412686 RABGGTBP53611 331 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 GRB10Q13322 594 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 STK38Q15208 465 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 OTUD6AQ7L8S5 288 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 CABP7Q86V35 215 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 RHPN2Q8IUC4 686 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 LINC00301Q8NCQ3 95 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 ASAP3Q8TDY4 903 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 SLC7A3Q8WY07 619 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 EPSTI1Q96J88 318 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 NLRP4Q96MN2 994 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 MAP7D2Q96T17 732 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 MTRQ99707 1265 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 FDXACB1Q9BRP7 624 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-202ENST00000412686 IFIH1Q9BYX4 1025 aaKnown RBP8.6□□□□□ -1.03
CPSF4-202ENST00000412686 RAB34Q9BZG1 259 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 BHMT2Q9H2M3 363 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 ADAMTS10Q9H324 1103 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 TMX1Q9H3N1 280 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
CPSF4-202ENST00000412686 ANKEF1Q9NU02 776 aa8.6□□□□□ -1.03
CPSF4-202ENST00000412686 SUCLA2Q9P2R7 463 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-202ENST00000412686 NOC2LQ9Y3T9 749 aaKnown RBP8.6□□□□□ -1.03
CPSF4-202ENST00000412686 KDM3AQ9Y4C1 1321 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 MGEA5O60502 916 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 ACTN1P12814 892 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 MYOGP15173 224 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 IBSPP21815 317 aaPredicted RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 TMOD1P28289 359 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 DDIT3P35638 169 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 RFC5P40937 340 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 FXR1P51114 621 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 WDR5P61964 334 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 SLC39A14Q15043 492 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 KARSQ15046 597 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 LRIT3Q3SXY7 679 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 TMEM119Q4V9L6 283 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 HYIQ5T013 277 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 FAM117BQ6P1L5 589 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 PADI6Q6TGC4 694 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 TSHZ1Q6ZSZ6 1077 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 FAM228AQ86W67 206 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 NME8Q8N427 588 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 SEPT8Q92599 483 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 CCDC43Q96MW1 224 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 ZNF396Q96N95 335 aaPredicted RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 SCLT1Q96NL6 688 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 NACC1Q96RE7 527 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 RUSC1Q9BVN2 902 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 POLR3FQ9H1D9 316 aaPredicted RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 ATP6V0A4Q9HBG4 840 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 ERVK-5Q9HDB9 667 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 DBR1Q9UK59 544 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 PADI3Q9ULW8 664 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 SRPRBQ9Y5M8 271 aaKnown RBP8.59□□□□□ -1.03
CPSF4-202ENST00000412686 COL4A3BPQ9Y5P4 624 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 SLC4A7Q9Y6M7 1214 aa8.59□□□□□ -1.03
CPSF4-202ENST00000412686 TCHHQ07283 1943 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 A0A087X0B3 334 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 ARHGEF35A5YM69 484 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 SPTLC2O15270 562 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 RPS6KA5O75582 802 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 DGAT1O75907 488 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 BAIAP3O94812 1187 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 EYA4O95677 639 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 RPLP2P05387 115 aaKnown RBP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 SSBP05455 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 SRGAP2CP0DJJ0 459 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 XRCC6P12956 609 aaKnown RBP eCLIP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 ATP2A2P16615 1042 aaKnown RBP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 PLCG1P19174 1290 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 GLRA2P23416 452 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 ARL2P36404 184 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 LONP1P36776 959 aaKnown RBP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 UBA7P41226 1012 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 CRYBB1P53674 252 aaPredicted RBP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 LAMTOR4Q0VGL1 99 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 PAK2Q13177 524 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 CAPSQ13938 189 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 RTN4RL1Q86UN2 441 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms