RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 VPS50Q96JG6 964 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 KCNC2Q96PR1 638 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 NR1H4Q96RI1 486 aaPredicted RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 FUCA2Q9BTY2 467 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 NACAP1Q9BZK3 213 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 EPN3Q9H201 632 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 PIH1D3Q9NQM4 214 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 DIABLOQ9NR28 239 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 AATFQ9NY61 560 aaKnown RBP eCLIP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 SUCLA2Q9P2R7 463 aaPredicted RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 LRFN2Q9ULH4 789 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 SMG5Q9UPR3 1016 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 ATP11BQ9Y2G3 1177 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 RTCBQ9Y3I0 505 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 CD2APQ9Y5K6 639 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 HECW1Q76N89 1606 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 TEX14Q8IWB6 1497 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 EFCAB5A4FU69 1503 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 HMGXB3Q12766 1538 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 KDM5BQ9UGL1 1544 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 MACROD2A1Z1Q3 448 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 HTR3EA5X5Y0 456 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 GOLGA8TH3BQL2 631 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 M0QX08 132 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NDC80O14777 642 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 HIP1RO75146 1068 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 DAB1O75553 588 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ATP5HO75947 161 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 FAM107AO95990 144 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 UBTFL6P0CB48 400 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 GOLGA8HP0CJ92 632 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 COL6A1P12109 1028 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 HCLS1P14317 486 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ALOX15P16050 662 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PTPN2P17706 415 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 SYT1P21579 422 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PTGS1P23219 599 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 MLH1P40692 756 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CASP2P42575 452 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CCT5P48643 541 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ALDH18A1P54886 795 aaKnown RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CTAG1AP78358 180 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ATP11AP98196 1134 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PLCB3Q01970 1234 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 DNAJC3Q13217 504 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 DPYSQ14117 519 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NFE2L1Q14494 772 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ZNF268Q14587 947 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CASP8Q14790 479 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 MAPRE1Q15691 268 aaKnown RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 SPATS1Q496A3 300 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 COBLL1Q53SF7 1204 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NAALADL2Q58DX5 795 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ODF2Q5BJF6 829 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 TMEM67Q5HYA8 995 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 SPECC1Q5M775 1068 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 FKBP15Q5T1M5 1219 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 KAZNQ674X7 775 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 C16orf46Q6P387 395 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CCDC62Q6P9F0 684 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CWC27Q6UX04 472 aaKnown RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PI16Q6UXB8 463 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 RBM43Q6ZSC3 357 aaKnown RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 TMC6Q7Z403 805 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PPFIBP1Q86W92 1011 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 RAB11FIP4Q86YS3 637 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 TREML1Q86YW5 311 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 SPERTQ8NA61 448 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 TNIP2Q8NFZ5 429 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ENOX1Q8TC92 643 aaKnown RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 STK32AQ8WU08 396 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NSMCE1Q8WV22 266 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NCSTNQ92542 709 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CENPTQ96BT3 561 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 EVI5LQ96CN4 794 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 HVCN1Q96D96 273 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 FGD4Q96M96 766 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 C8orf37Q96NL8 207 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 TUBGCP5Q96RT8 1024 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 SH3GL2Q99962 352 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 UQCC2Q9BRT2 126 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 AGXT2Q9BYV1 514 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 DRC3Q9H069 523 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 ZHX3Q9H4I2 956 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PDE11AQ9HCR9 933 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 SLC39A2Q9NP94 309 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 SH2B1Q9NRF2 756 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CXXC1Q9P0U4 656 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 CRNNQ9UBG3 495 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 STK39Q9UEW8 545 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NRBP1Q9UHY1 535 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 MYRFQ9Y2G1 1151 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NUP160Q12769 1436 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 NAIPQ13075 1403 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 FAM135BQ49AJ0 1406 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PITPNM2Q9BZ72 1349 aa3.92□□□□□ -1.78
XRCC4-203ENST00000396027 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.91□□□□□ -1.78
XRCC4-203ENST00000396027 CENPBD1B2RD01 187 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms