RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ATP1A2P50993 1020 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 DRAP1Q14919 205 aaPredicted RBP11.9□□□□□ -0.5
BEST1-201ENST00000378043 UAP1Q16222 522 aaPredicted RBP11.9□□□□□ -0.5
BEST1-201ENST00000378043 B3GNT9Q6UX72 402 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 EIF1ADQ8N9N8 165 aaKnown RBP11.9□□□□□ -0.5
BEST1-201ENST00000378043 RNPC3Q96LT9 517 aaKnown RBP11.9□□□□□ -0.5
BEST1-201ENST00000378043 MKNK1Q9BUB5 465 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 AGPAT3Q9NRZ7 376 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 DNAJC12Q9UKB3 198 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 TMCO5BA8MYB1 307 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 BUB1BO60566 1050 aaPredicted RBP11.9□□□□□ -0.5
BEST1-201ENST00000378043 PRELPP51888 382 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 NPEPPSP55786 919 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 CCDC174Q6PII3 467 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 DAAM2Q86T65 1068 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 PALB2Q86YC2 1186 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 BANK1Q8NDB2 785 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.9□□□□□ -0.5
BEST1-201ENST00000378043 YDJCA8MPS7 323 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 H0YGN5 161 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 MAGEA9P43362 315 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 CYP2J2P51589 502 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 CEP55Q53EZ4 464 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 KDM7AQ6ZMT4 941 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 FAM178BQ8IXR5 827 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 DAW1Q8N136 415 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 SLC35G2Q8TBE7 412 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.89□□□□□ -0.51
BEST1-201ENST00000378043 STRA6Q9BX79 667 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 AMACRQ9UHK6 382 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 PPP1R9AQ9ULJ8 1098 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 SYNPO2Q9UMS6 1093 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 PLAAQ9Y263 795 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 TMX2Q9Y320 296 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 NR2E1Q9Y466 385 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 COL2A1P02458 1487 aaPredicted RBP11.89□□□□□ -0.51
BEST1-201ENST00000378043 FAM170AA1A519 330 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
BEST1-201ENST00000378043 KRIT1O00522 736 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 GAS7O60861 476 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 PPP1R37O75864 691 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 VIL1P09327 827 aaKnown RBP11.89□□□□□ -0.51
BEST1-201ENST00000378043 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 FLT3P36888 993 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 HSD17B3P37058 310 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 PPATQ06203 517 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 MAPK7Q13164 816 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
BEST1-201ENST00000378043 CUL1Q13616 776 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 HLTFQ14527 1009 aaKnown RBP eCLIP11.89□□□□□ -0.51
BEST1-201ENST00000378043 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 C1orf131Q8NDD1 294 aaKnown RBP11.89□□□□□ -0.51
BEST1-201ENST00000378043 LMO3Q8TAP4 145 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.89□□□□□ -0.51
BEST1-201ENST00000378043 SEL1LQ9UBV2 794 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 NCANO14594 1321 aa11.89□□□□□ -0.51
BEST1-201ENST00000378043 LOXHD1Q8IVV2 1947 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 GUCY1A3Q02108 690 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 ODR4Q5SWX8 454 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 PHLDB3Q6NSJ2 640 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 LMBR1Q8WVP7 490 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 C7orf43Q8WVR3 580 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 ATP6V1G3Q96LB4 118 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 NACC1Q96RE7 527 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 TCP10L2B9ZVM9 353 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 CCDC188H7C350 402 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 LRRN2O75325 713 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 CHRNA5P30532 468 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 ITGB3BPQ13352 177 aaPredicted RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 HS2ST1Q7LGA3 356 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 SYCE1Q8N0S2 351 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 OR2W6PQ8NHA6 318 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 RFFLQ8WZ73 363 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 SEC14L1Q92503 715 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 ARHGEF26Q96DR7 871 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 ZNF577Q9BSK1 485 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 CELF4Q9BZC1 486 aaKnown RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 INTS2Q9H0H0 1204 aaKnown RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 APEX2Q9UBZ4 518 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 HERC5Q9UII4 1024 aaKnown RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 UBE4BO95155 1302 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 EBAG9O00559 213 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 DDX3YO15523 660 aaKnown RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 DAPK3O43293 454 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 PPP1R12BO60237 982 aaPredicted RBP11.88□□□□□ -0.51
BEST1-201ENST00000378043 TMEM253P0C7T8 217 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 NR1D1P20393 614 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 LMNB1P20700 586 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 ABCB4P21439 1286 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 LXNQ9BS40 222 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms