RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.273e-24■■□□□ 11.5
UBR4-203ENST00000375225 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
UBR4-203ENST00000375225 IWS1Q96ST2 819 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
UBR4-203ENST00000375225 GCNT4Q9P109 453 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 HPCAL4Q9UM19 191 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 CTDP1Q9Y5B0 961 aaPredicted RBP13.34□□□□□ -0.27
UBR4-203ENST00000375225 CSADQ9Y600 493 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 MYH10P35580 1976 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 H3BQF6 201 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 EML1O00423 815 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 NKRFO15226 690 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBR4-203ENST00000375225 AKAP3O75969 853 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 FDX1P10109 184 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 LMAN1P49257 510 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 ZNF131P52739 623 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 NPEPPSP55786 919 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 BACE1P56817 501 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 ARID5AQ03989 594 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 PAK2Q13177 524 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 PRKG1Q13976 671 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
UBR4-203ENST00000375225 MEI1Q5TIA1 1274 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 ALS2CLQ60I27 953 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 LDHDQ86WU2 507 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 SLC9A9Q8IVB4 645 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 AFAP1L1Q8TED9 768 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 CDCA5Q96FF9 252 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 P2RX7Q99572 595 aaKnown RBP13.34□□□□□ -0.27
UBR4-203ENST00000375225 MXRA8Q9BRK3 442 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 TLR10Q9BXR5 811 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 RGL1Q9NZL6 768 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 LARSQ9P2J5 1176 aaKnown RBP13.34□□□□□ -0.27
UBR4-203ENST00000375225 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 GOLGA6BA6NDN3 693 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 ERICH4A6NGS2 130 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 LRRIQ3A6PVS8 624 aaPredicted RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 GOLGA8KD6RF30 607 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 PDE2AO00408 941 aaPredicted RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 CHMP2AO43633 222 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 HSF2BPO75031 334 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 TFRCP02786 760 aaKnown RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 ICAM1P05362 532 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 H2AFZP0C0S5 128 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 NOP2P46087 812 aaKnown RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 SPP2Q13103 211 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 H2AFVQ71UI9 128 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 MIER3Q7Z3K6 550 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 SYCP3Q8IZU3 236 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 EIF1ADQ8N9N8 165 aaKnown RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 AENQ8WTP8 325 aaKnown RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 STK33Q9BYT3 514 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 CCPG1Q9ULG6 757 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 DIS3Q9Y2L1 958 aaKnown RBP13.33□□□□□ -0.28
UBR4-203ENST00000375225 ZHX2Q9Y6X8 837 aa13.33□□□□□ -0.28
UBR4-203ENST00000375225 A0A087X0T9 212 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 IPO5O00410 1097 aaKnown RBP13.32□□□□□ -0.28
UBR4-203ENST00000375225 P4HA2O15460 535 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 P4HBP07237 508 aaKnown RBP13.32□□□□□ -0.28
UBR4-203ENST00000375225 FAM228BP0C875 321 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 VCAM1P19320 739 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 SLC9A1P19634 815 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 KLRC1P26715 233 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 HSD17B4P51659 736 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 PTK2Q05397 1052 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 PPFIA1Q13136 1202 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 TTLL12Q14166 644 aaPredicted RBP13.32□□□□□ -0.28
UBR4-203ENST00000375225 MUM1L1Q5H9M0 696 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 ODR4Q5SWX8 454 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 ALKBH5Q6P6C2 394 aaKnown RBP13.32□□□□□ -0.28
UBR4-203ENST00000375225 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 IRF2BP2Q7Z5L9 587 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 ANKRD13CQ8N6S4 541 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 PRPF38AQ8NAV1 312 aaKnown RBP13.32□□□□□ -0.28
UBR4-203ENST00000375225 RBM46Q8TBY0 533 aaKnown RBP13.32□□□□□ -0.28
UBR4-203ENST00000375225 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 CAVIN3Q969G5 261 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 SLC35C1Q96A29 364 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 TBC1D22BQ9NU19 505 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 TMOD4Q9NZQ9 345 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 NAGPAQ9UK23 515 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 DBR1Q9UK59 544 aaKnown RBP13.32□□□□□ -0.28
UBR4-203ENST00000375225 FZD1Q9UP38 647 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 FAN1Q9Y2M0 1017 aa13.32□□□□□ -0.28
UBR4-203ENST00000375225 PARP14Q460N5 1801 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 CLIC2O15247 247 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 RNF40O75150 1001 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 HOXD13P35453 343 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 MATR3P43243 847 aaKnown RBP eCLIP13.31□□□□□ -0.28
UBR4-203ENST00000375225 FMO5P49326 533 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 JAM2P57087 298 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 VGLL4Q14135 290 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms