RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 WDR46O15213 610 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 CLIC2O15247 247 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 AKAP3O75969 853 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 HSD17B4P51659 736 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 NAP1L1P55209 391 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 APBA1Q02410 837 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 LONRF2Q1L5Z9 754 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 NOA1Q8NC60 698 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 RPGRIP1Q96KN7 1286 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 DRC1Q96MC2 740 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 PNKPQ96T60 521 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 RIT2Q99578 217 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 MCOLN1Q9GZU1 580 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 BCAS3Q9H6U6 928 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 MLXIPQ9HAP2 919 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 LOC285556D6RIA3 1793 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 BRCA2P51587 3418 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 DDX39AO00148 427 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 MOCS3O95396 460 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 ALAS1P13196 640 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 NMT1P30419 496 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 GABPB1Q06547 395 aaPredicted RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 KCNA1Q09470 495 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 KLHL30Q0D2K2 578 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 EXOC3L4Q17RC7 722 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 ASTE1Q2TB18 679 aaPredicted RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 Q3C1V9 767 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 STXBP4Q6ZWJ1 553 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 HNRNPLLQ8WVV9 542 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 SPAG5Q96R06 1193 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 MMS19Q96T76 1030 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 PARK7Q99497 189 aaKnown RBP13.24□□□□□ -0.29
HMGCL-202ENST00000374487 LXNQ9BS40 222 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 SEL1LQ9UBV2 794 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 PCDHB13Q9Y5F0 798 aa13.24□□□□□ -0.29
HMGCL-202ENST00000374487 ASTN1O14525 1302 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 SMCHD1A6NHR9 2005 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 NFIBO00712 420 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
HMGCL-202ENST00000374487 BCRP11274 1271 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 ASIC2Q16515 512 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
HMGCL-202ENST00000374487 FAM178BQ8IXR5 827 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 FAM133AQ8N9E0 248 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 BANK1Q8NDB2 785 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 KCNH7Q9NS40 1196 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 TRIM17Q9Y577 477 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 CAPN6Q9Y6Q1 641 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 ZNF536O15090 1300 aa13.23□□□□□ -0.29
HMGCL-202ENST00000374487 FLOT1O75955 427 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 SASH3O75995 380 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 ACTN1P12814 892 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 ITGB5P18084 799 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 SLC9A1P19634 815 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 CASP4P49662 377 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 IQCEQ6IPM2 695 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 C12orf42Q96LP6 360 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 NOX5Q96PH1 765 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 PAGR1Q9BTK6 254 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 GBP3Q9H0R5 595 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 RAVER2Q9HCJ3 691 aaKnown RBP13.22□□□□□ -0.29
HMGCL-202ENST00000374487 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
HMGCL-202ENST00000374487 RBPJLQ9UBG7 517 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 ODF2LQ9ULJ1 636 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 RBAK-RBAKDNI3L0D1 243 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 ZNF185O15231 689 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 PJA2O43164 708 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 TGFB1I1O43294 461 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 PSMC2P35998 433 aaKnown RBP13.22□□□□□ -0.29
HMGCL-202ENST00000374487 IRX3P78415 501 aaPredicted RBP13.22□□□□□ -0.29
HMGCL-202ENST00000374487 LACTBP83111 547 aaPredicted RBP13.22□□□□□ -0.29
HMGCL-202ENST00000374487 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 CATSPERGQ6ZRH7 1159 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 HS2ST1Q7LGA3 356 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 RNF10Q8N5U6 811 aaKnown RBP13.22□□□□□ -0.29
HMGCL-202ENST00000374487 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 GANQ9H2C0 597 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
HMGCL-202ENST00000374487 PLCB1Q9NQ66 1216 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 SNX12Q9UMY4 172 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 SAMM50Q9Y512 469 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 FRMPD4Q14CM0 1322 aa13.22□□□□□ -0.29
HMGCL-202ENST00000374487 CAPN15O75808 1086 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 UCHL3P15374 230 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 PON1P27169 355 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 SLC18A3Q16572 532 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms