RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 OTOFQ9HC10 1997 aa20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 ATP8B1O43520 1251 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 USP2O75604 605 aaPredicted RBP20■□□□□ 0.79
PDLIM7-203ENST00000359895 TUBBP07437 444 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 GFPT1Q06210 699 aaPredicted RBP20■□□□□ 0.79
PDLIM7-203ENST00000359895 BMS1Q14692 1282 aaKnown RBP20■□□□□ 0.79
PDLIM7-203ENST00000359895 ARID3AQ99856 593 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 CYP39A1Q9NYL5 469 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 GCNT4Q9P109 453 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 PCDHA10Q9Y5I2 948 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 DUSP10Q9Y6W6 482 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 A0A0G2JMZ2 1700 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 MYH9P35579 1960 aaKnown RBP20■□□□□ 0.79
PDLIM7-203ENST00000359895 DOCK5Q9H7D0 1870 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 SPDYE16A6NNV3 312 aaPredicted RBP20■□□□□ 0.79
PDLIM7-203ENST00000359895 CCNE2O96020 404 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 ACTN1P12814 892 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 FMO5P49326 533 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 CYP2J2P51589 502 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 OTUD6AQ7L8S5 288 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 FMNL3Q8IVF7 1028 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 KSR1Q8IVT5 923 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 FAM133AQ8N9E0 248 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 MSANTD4Q8NCY6 345 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 PARD6BQ9BYG5 372 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 FZD1Q9UP38 647 aa20■□□□□ 0.79
PDLIM7-203ENST00000359895 ENC1O14682 589 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 EXOC3O60645 756 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 PRLRP16471 622 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 PRKCIP41743 596 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 GTF2BQ00403 316 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 APBA1Q02410 837 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 BRD3Q15059 726 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 UGCGQ16739 394 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 GNPTABQ3T906 1256 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 XKR9Q5GH70 373 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 CHST13Q8NET6 341 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 ATP6V0A1Q93050 837 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 HVCN1Q96D96 273 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 NOX5Q96PH1 765 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 SIX2Q9NPC8 291 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 FHOD1Q9Y613 1164 aa19.99■□□□□ 0.79
PDLIM7-203ENST00000359895 ATP8B3O60423 1300 aa19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 BACH1O14867 736 aa19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 PSAPP07602 524 aa19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 KRT13P13646 458 aa19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 ZSCAN20P17040 1043 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 NCKAP1LP55160 1127 aa19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 A1CFQ9NQ94 594 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 ADARB2Q9NS39 739 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 ZNF446Q9NWS9 450 aa19.98■□□□□ 0.79
PDLIM7-203ENST00000359895 CCDC151A5D8V7 595 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 MAPK13O15264 365 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 MOCS3O95396 460 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 KCNA2P16389 499 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 JAM2P57087 298 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 PLS1Q14651 629 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 GLIPR1L2Q4G1C9 344 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 IQCEQ6IPM2 695 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 MAEAQ7L5Y9 396 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 HAUS6Q7Z4H7 955 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 IRF2BP2Q7Z5L9 587 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 IKZF4Q9H2S9 585 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 MLXIPQ9HAP2 919 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 HDAC6Q9UBN7 1215 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 EXOC7Q9UPT5 735 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 SNCAIPQ9Y6H5 919 aa19.97■□□□□ 0.79
PDLIM7-203ENST00000359895 N4BP1O75113 896 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 ZRANB2O95218 330 aaKnown RBP eCLIP19.96■□□□□ 0.792e-6■■■□□ 18.6
PDLIM7-203ENST00000359895 FERP16591 822 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 SMTNP53814 917 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 ARID5AQ03989 594 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 BFSP1Q12934 665 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 INTS8Q75QN2 995 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 VPS36Q86VN1 386 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 DNERQ8NFT8 737 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 DCPSQ96C86 337 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 C17orf75Q9HAS0 396 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 FAM53CQ9NYF3 392 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 FBXO40Q9UH90 709 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 TSKSQ9UJT2 592 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 RAB21Q9UL25 225 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 CSADQ9Y600 493 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 CAPN6Q9Y6Q1 641 aa19.96■□□□□ 0.79
PDLIM7-203ENST00000359895 BTNL10A8MVZ5 291 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 GFPT2O94808 682 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 RFX1P22670 979 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 STAT1P42224 750 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 MYL7Q01449 175 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 VGLL4Q14135 290 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 NAB2Q15742 525 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 KIFAP3Q92845 792 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 ANKZF1Q9H8Y5 726 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 JPH1Q9HDC5 661 aaPredicted RBP19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 ARFGAP3Q9NP61 516 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 SLC9A2Q9UBY0 812 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 SNX12Q9UMY4 172 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 PFASO15067 1338 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms