RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 AKR1B10O60218 316 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 GDF11O95390 407 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 SFPQP23246 707 aaKnown RBP eCLIP6.26□□□□□ -1.41
CD47-201ENST00000355354 GJA8P48165 433 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 LMAN1P49257 510 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 LACTBP83111 547 aaPredicted RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 RNF111Q6ZNA4 994 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 ZNF571Q7Z3V5 609 aaPredicted RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 IQCKQ8N0W5 287 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 PLAC1Q9HBJ0 212 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 KBTBD4Q9NVX7 518 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 R3HDM2Q9Y2K5 976 aaKnown RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 MYPNQ86TC9 1320 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 BECN2A8MW95 431 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 TGFB1I1O43294 461 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 GNRH1P01148 92 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 HDCP19113 662 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 TXKP42681 527 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 LHX8Q68G74 356 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 TMTC3Q6ZXV5 915 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 ANKRD18AQ8IVF6 992 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 ADSSL1Q8N142 457 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 ANKRD2Q9GZV1 360 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 ALDH8A1Q9H2A2 487 aaPredicted RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 FAM204AQ9H8W3 233 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 SLCO1B3Q9NPD5 702 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 PPP1R9AQ9ULJ8 1098 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 CACNA1AO00555 2505 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 LRRC53A6NM62 1247 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 MEIS2O14770 477 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 AFF1P51825 1210 aaKnown RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 GABPAQ06546 454 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 ZSCAN26Q16670 478 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 SCFD1Q8WVM8 642 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 INPP4AQ96PE3 977 aaPredicted RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 ZIM3Q96PE6 472 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 LPIN3Q9BQK8 851 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 MORF4L1Q9UBU8 362 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 BTBD19C9JJ37 291 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 STXBP3O00186 592 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 IRAK1P51617 712 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 PLA2G4EQ3MJ16 856 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 KIAA2026Q5HYC2 2103 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 IRF2BP2Q7Z5L9 587 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 FAM110BQ8TC76 370 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 ATG4AQ8WYN0 398 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 RNPC3Q96LT9 517 aaKnown RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 TRIM51Q9BSJ1 452 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 TRIM31Q9BZY9 425 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 NAPBQ9H115 298 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 SIX2Q9NPC8 291 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 MCM9Q9NXL9 1143 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 PKD2L1Q9P0L9 805 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 AMACRQ9UHK6 382 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 PCDHA3Q9Y5H8 950 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 PDCD11Q14690 1871 aaKnown RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 PARP1P09874 1014 aaKnown RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 ZSCAN5DPP0CG00 497 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 ARRB2P32121 409 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 POU5F1Q01860 360 aaKnown RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 MORN1Q5T089 497 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 TATDN1Q6P1N9 297 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 DDX19AQ9NUU7 478 aaKnown RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 NFU1Q9UMS0 254 aa6.25□□□□□ -1.41
CD47-201ENST00000355354 SRPRBQ9Y5M8 271 aaKnown RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 HEMK1Q9Y5R4 338 aaPredicted RBP6.25□□□□□ -1.41
CD47-201ENST00000355354 MYLKQ15746 1914 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 A0A1W2PQ27 194 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 A0A1W2PQ64 194 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 A0A1W2PQD8 194 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 GOLGA6L22H0YM25 854 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 MYBP10242 640 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 CCT5P48643 541 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 STIM1Q13586 685 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 FAM47EQ6ZV65 393 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 FBXL16Q8N461 479 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 PNMA1Q8ND90 353 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 RPL10LQ96L21 214 aaKnown RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 C20orf27Q9GZN8 174 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 LRP2BPQ9P2M1 347 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 UMODL1Q5DID0 1318 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 DOCK10Q96BY6 2186 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 DHX16O60231 1041 aaKnown RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 NDUFA10O95299 355 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 ATP2C1P98194 919 aaPredicted RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 STX1AQ16623 288 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 RBM26Q5T8P6 1007 aaKnown RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 TRAPPC11Q7Z392 1133 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 KIAA0825Q8IV33 1275 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 ATP8B4Q8TF62 1192 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 PI4K2AQ9BTU6 479 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 SLC17A6Q9P2U8 582 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 MAGEC2Q9UBF1 373 aaPredicted RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 GPR75-ASB3A0A0A6YYF3 556 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 TMX2-CTNND1H3BSU7 103 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 FMNL1O95466 1100 aaPredicted RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 YEATS4O95619 227 aa6.24□□□□□ -1.41
CD47-201ENST00000355354 RPL10P27635 214 aaKnown RBP6.24□□□□□ -1.41
CD47-201ENST00000355354 NMT1P30419 496 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms