RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CDHR5Q9HBB8 845 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 DBR1Q9UK59 544 aaKnown RBP21.38■■□□□ 1.01
SYNE4-202ENST00000340477 YBX2Q9Y2T7 364 aaKnown RBP21.38■■□□□ 1.01
SYNE4-202ENST00000340477 COL4A3BPQ9Y5P4 624 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 ARHGEF35A5YM69 484 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 VWA3AA6NCI4 1184 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 UPP2O95045 317 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 CA3P07451 260 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 DARSP14868 501 aaKnown RBP21.37■■□□□ 1.01
SYNE4-202ENST00000340477 SFPQP23246 707 aaKnown RBP eCLIP21.37■■□□□ 1.01
SYNE4-202ENST00000340477 RARRES1P49788 294 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 MKRN4PQ13434 485 aaPredicted RBP21.37■■□□□ 1.01
SYNE4-202ENST00000340477 DRP2Q13474 957 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 TMEM40Q8WWA1 233 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 YME1L1Q96TA2 773 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 ERVK-5Q9HDB9 667 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 MTMR10Q9NXD2 777 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 ST3GAL5Q9UNP4 418 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 MTMR6Q9Y217 621 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 INSL6Q9Y581 213 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 SZT2Q5T011 3432 aa21.37■■□□□ 1.01
SYNE4-202ENST00000340477 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.36■■□□□ 1.01
SYNE4-202ENST00000340477 ZBTB39O15060 712 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 ASAP2O43150 1006 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 STAG3L1P0CL83 205 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 MYOGP15173 224 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 RESTQ13127 1097 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 TFDP1Q14186 410 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 MXD4Q14582 209 aaPredicted RBP21.36■■□□□ 1.01
SYNE4-202ENST00000340477 TMCO2Q7Z6W1 182 aaPredicted RBP21.36■■□□□ 1.01
SYNE4-202ENST00000340477 FAM228AQ86W67 206 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 ZNF579Q8NAF0 562 aaKnown RBP21.36■■□□□ 1.01
SYNE4-202ENST00000340477 MCPH1Q8NEM0 835 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 TOP1MTQ969P6 601 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 TMEM143Q96AN5 459 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 CDK5RAP3Q96JB5 506 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 ZNF668Q96K58 619 aaPredicted RBP21.36■■□□□ 1.01
SYNE4-202ENST00000340477 TSPYL2Q9H2G4 693 aaPredicted RBP21.36■■□□□ 1.01
SYNE4-202ENST00000340477 TTYH1Q9H313 450 aaPredicted RBP21.36■■□□□ 1.01
SYNE4-202ENST00000340477 C1orf112Q9NSG2 853 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 LRFN2Q9ULH4 789 aa21.36■■□□□ 1.01
SYNE4-202ENST00000340477 MYH15Q9Y2K3 1946 aa21.35■■□□□ 1.01
SYNE4-202ENST00000340477 ENPP3O14638 875 aa21.35■■□□□ 1.01
SYNE4-202ENST00000340477 USO1O60763 962 aaKnown RBP21.35■■□□□ 1.01
SYNE4-202ENST00000340477 SLC34A2O95436 690 aa21.35■■□□□ 1.01
SYNE4-202ENST00000340477 ZSCAN20P17040 1043 aaPredicted RBP21.35■■□□□ 1.01
SYNE4-202ENST00000340477 BECN1Q14457 450 aa21.35■■□□□ 1.01
SYNE4-202ENST00000340477 SF3A1Q15459 793 aaKnown RBP21.35■■□□□ 1.01
SYNE4-202ENST00000340477 PRPF31Q8WWY3 499 aaKnown RBP21.35■■□□□ 1.01
SYNE4-202ENST00000340477 AK8Q96MA6 479 aa21.35■■□□□ 1.01
SYNE4-202ENST00000340477 KIAA1024Q9UPX6 916 aa21.35■■□□□ 1.01
SYNE4-202ENST00000340477 A0A087WZ62 844 aa21.34■■□□□ 1.01
SYNE4-202ENST00000340477 PHKA2P46019 1235 aa21.34■■□□□ 1.01
SYNE4-202ENST00000340477 LAMTOR4Q0VGL1 99 aa21.34■■□□□ 1.01
SYNE4-202ENST00000340477 ZRSR1Q15695 479 aaKnown RBP21.34■■□□□ 1.01
SYNE4-202ENST00000340477 NPAS4Q8IUM7 802 aa21.34■■□□□ 1.01
SYNE4-202ENST00000340477 SPRYD3Q8NCJ5 442 aa21.34■■□□□ 1.01
SYNE4-202ENST00000340477 FDXACB1Q9BRP7 624 aaPredicted RBP21.34■■□□□ 1.01
SYNE4-202ENST00000340477 NT5C3AQ9H0P0 336 aa21.34■■□□□ 1.01
SYNE4-202ENST00000340477 DDX19AQ9NUU7 478 aaKnown RBP21.34■■□□□ 1.01
SYNE4-202ENST00000340477 DNM3Q9UQ16 869 aa21.34■■□□□ 1.01
SYNE4-202ENST00000340477 TTC3P53804 2025 aa21.33■■□□□ 1.01
SYNE4-202ENST00000340477 SRGAP2CP0DJJ0 459 aa21.33■■□□□ 1.01
SYNE4-202ENST00000340477 IBSPP21815 317 aaPredicted RBP21.33■■□□□ 1.01
SYNE4-202ENST00000340477 RASSF8Q8NHQ8 419 aa21.33■■□□□ 1.01
SYNE4-202ENST00000340477 GAS2L1Q99501 681 aaPredicted RBP21.33■■□□□ 1.01
SYNE4-202ENST00000340477 ADAM2Q99965 735 aa21.33■■□□□ 1.01
SYNE4-202ENST00000340477 TMX1Q9H3N1 280 aa21.33■■□□□ 1.01
SYNE4-202ENST00000340477 PP2D1A8MPX8 630 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 SARSP49591 514 aaKnown RBP21.32■■□□□ 1
SYNE4-202ENST00000340477 HTRA4P83105 476 aaPredicted RBP21.32■■□□□ 1
SYNE4-202ENST00000340477 IL17AQ16552 155 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 PADI6Q6TGC4 694 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 CATSPER4Q7RTX7 472 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 SRGAP1Q7Z6B7 1085 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 KSR1Q8IVT5 923 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 KCTD17Q8N5Z5 321 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 RNF149Q8NC42 400 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 LINC01599Q8WXQ3 324 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 ZNF396Q96N95 335 aaPredicted RBP21.32■■□□□ 1
SYNE4-202ENST00000340477 POLR3FQ9H1D9 316 aaPredicted RBP21.32■■□□□ 1
SYNE4-202ENST00000340477 BHMT2Q9H2M3 363 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 XPNPEP1Q9NQW7 623 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 DACT1Q9NYF0 836 aa21.32■■□□□ 1
SYNE4-202ENST00000340477 COL4A6Q14031 1691 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 A0A087WWV3 80 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 SLC26A4O43511 780 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 LONP1P36776 959 aaKnown RBP21.31■■□□□ 1
SYNE4-202ENST00000340477 UBA7P41226 1012 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 FAM102BQ5T8I3 360 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 SLC24A5Q71RS6 500 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 CALML4Q96GE6 196 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 GUCD1Q96NT3 240 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 CDX2Q99626 313 aaPredicted RBP21.31■■□□□ 1
SYNE4-202ENST00000340477 RGS18Q9NS28 235 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 PCDHB7Q9Y5E2 793 aa21.31■■□□□ 1
SYNE4-202ENST00000340477 FOSL2P15408 326 aa21.3■■□□□ 1
SYNE4-202ENST00000340477 CDC25AP30304 524 aa21.3■■□□□ 1
SYNE4-202ENST00000340477 TAP1Q03518 808 aa21.3■■□□□ 1
SYNE4-202ENST00000340477 CEBPZQ03701 1054 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms