RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 FAM153BP0C7A2 387 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 PCP11498 1178 aaKnown RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 PABPC1P11940 636 aaKnown RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 HSD17B3P37058 310 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ERVK-24P63145 666 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 NIPAL4Q0D2K0 466 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 CUL1Q13616 776 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 FAM153CQ494X1 144 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 INTS8Q75QN2 995 aaKnown RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 STMN2Q93045 179 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 FNBP1Q96RU3 617 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 STMN4Q9H169 189 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 GLT8D2Q9H1C3 349 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 TCP11L1Q9NUJ3 509 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 FAM153AQ9UHL3 310 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ANGPTL2Q9UKU9 493 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 MACROD2A1Z1Q3 448 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 SEMA3EO15041 775 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 MCF2LO15068 1137 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 HNRNPCL1O60812 293 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 KRT6AP02538 564 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 KRT6BP04259 564 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 CHN1P15882 459 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 CHKAP35790 457 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 AP3M2P53677 418 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 RRS1Q15050 365 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 PCSK7Q16549 785 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 CFAP221Q4G0U5 840 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 CEP78Q5JTW2 689 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 TRIML2Q8N7C3 387 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 LSMEM1Q8N8F7 131 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 LINC00301Q8NCQ3 95 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 SUPT20HQ8NEM7 779 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 COG3Q96JB2 828 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 DDX50Q9BQ39 737 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 GAKO14976 1311 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 CENPBD1B2RD01 187 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 KCNJ13O60928 360 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 TRPA1O75762 1119 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 AFPP02771 609 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 OCM2P0CE71 109 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 OCMP0CE72 109 aaPredicted RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 CDH3P22223 829 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 IL32P24001 234 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 GTF2H1P32780 548 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 POLR2FP61218 127 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 NOP14P78316 857 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 SLC27A3Q5K4L6 730 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 MIGA2Q7L4E1 593 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 ANKMY2Q8IV38 441 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 NELFCDQ8IXH7 590 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 BBOF1Q8ND07 529 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 SELENOSQ9BQE4 189 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 SPZ1Q9BXG8 430 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 SNX25Q9H3E2 840 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 DDX18Q9NVP1 670 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 TRIM10Q9UDY6 481 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 ABCC6O95255 1503 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 TMCC2O75069 709 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 BAIAP3O94812 1187 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 CHEK2O96017 543 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 OAS1P00973 400 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 PFKFB1P16118 471 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 CES1P23141 567 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 RPS6KB1P23443 525 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 EPS15P42566 896 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 DSTNP60981 165 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 KRT76Q01546 638 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 TNIP1Q15025 636 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 LMOD2Q6P5Q4 547 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 DGLUCYQ7Z3D6 616 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 ITIH5Q86UX2 942 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 CDKL2Q92772 493 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 SENP7Q9BQF6 1050 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 RIOK1Q9BRS2 568 aaKnown RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 INO80BQ9C086 356 aaPredicted RBP9.22□□□□□ -0.93
TDP1-201ENST00000335725 TCF7L2Q9NQB0 619 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 HACD3Q9P035 362 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 DMTF1Q9Y222 760 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 CAPN6Q9Y6Q1 641 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 ZNF536O15090 1300 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 UMODL1Q5DID0 1318 aa9.22□□□□□ -0.93
TDP1-201ENST00000335725 H0YGN5 161 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 CRYZL1O95825 349 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 MARK3P27448 753 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 PBX1P40424 430 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 DSG1Q02413 1049 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 STK3Q13188 491 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 BBS9Q3SYG4 887 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 RNF43Q68DV7 783 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 FASTKD5Q7L8L6 764 aaKnown RBP9.21□□□□□ -0.93
TDP1-201ENST00000335725 UNC5CLQ8IV45 518 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 ATXN2LQ8WWM7 1075 aaKnown RBP9.21□□□□□ -0.93
TDP1-201ENST00000335725 IL25Q9H293 177 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 TLR7Q9NYK1 1049 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms