RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FAM13AO94988 1023 aa18.88■□□□□ 0.61
PTP4A3-201ENST00000329397 LLGL1Q15334 1064 aa18.88■□□□□ 0.61
PTP4A3-201ENST00000329397 UBAP2Q5T6F2 1119 aaKnown RBP18.88■□□□□ 0.61
PTP4A3-201ENST00000329397 DYDC2Q96IM9 177 aa18.88■□□□□ 0.61
PTP4A3-201ENST00000329397 DNAJC12Q9UKB3 198 aa18.88■□□□□ 0.61
PTP4A3-201ENST00000329397 NENFQ9UMX5 172 aa18.88■□□□□ 0.61
PTP4A3-201ENST00000329397 SMIM23A6NLE4 172 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 TISP43B9A030 160 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 F8VZ95 297 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 ATP2C2O75185 946 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 STAT1P42224 750 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 CUL1Q13616 776 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 IFI16Q16666 785 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 TMEM132AQ24JP5 1023 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 MMS22LQ6ZRQ5 1243 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 B4GALNT4Q76KP1 1039 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 VPS36Q86VN1 386 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 MDM1Q8TC05 714 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 NAP1L4Q99733 375 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 UBAP1LF5GYI3 381 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 POLRMTO00411 1230 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 CFBP00751 764 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 MAGOHP61326 146 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 NBPF20Q3BBV1 942 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 KRT71Q3SY84 523 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 C10orf76Q5T2E6 689 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 UHMK1Q8TAS1 419 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 MAGOHBQ96A72 148 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 WDR18Q9BV38 432 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 THAP2Q9H0W7 228 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 GOPCQ9HD26 462 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 WRAP73Q9P2S5 460 aaPredicted RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 FAM198AQ9UFP1 575 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 KIF13BQ9NQT8 1826 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 TMEM110-MUSTN1A8MSY1 372 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 KCNA4P22459 653 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 RPL13P26373 211 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 HOXA10P31260 410 aaPredicted RBP18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 SREBF1P36956 1147 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 AP3B2Q13367 1082 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 TMC3Q7Z5M5 1100 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 PKD2L1Q9P0L9 805 aa18.87■□□□□ 0.61
PTP4A3-201ENST00000329397 GREB1LQ9C091 1923 aaPredicted RBP18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 HOXA7P31268 230 aaPredicted RBP18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 SLFN11Q7Z7L1 901 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 CYFIP2Q96F07 1278 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 BORCS6Q96GS4 357 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 HES6Q96HZ4 224 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 SH2D3AQ9BRG2 576 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 AMFRQ9UKV5 643 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 COG5Q9UP83 839 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 SOX5P35711 763 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 MARCKSL1P49006 195 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 FMO5P49326 533 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 Q4G0T1 1027 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 ZNF746Q6NUN9 644 aaPredicted RBP18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 SLC20A1Q8WUM9 679 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 LRRC45Q96CN5 670 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 SUCLA2Q9P2R7 463 aaPredicted RBP18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 SLC12A6Q9UHW9 1150 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
PTP4A3-201ENST00000329397 FAM107AO95990 144 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 GH2P01242 217 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 SHBGP04278 402 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 RRP1BQ14684 758 aaKnown RBP18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 SYDE2Q5VT97 1194 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 DCAF4Q8WV16 495 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 ALG3Q92685 438 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 CRAMP1Q96RY5 1269 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 GPR88Q9GZN0 384 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 METTL14Q9HCE5 456 aaKnown RBP18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 DDX39AO00148 427 aaKnown RBP18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 CES2O00748 559 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 EYA4O95677 639 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 FNTAP49354 379 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 MNAT1P51948 309 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 CPNE8Q86YQ8 564 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 CALR3Q96L12 384 aaKnown RBP18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 CCDC17Q96LX7 622 aa18.85■□□□□ 0.61
PTP4A3-201ENST00000329397 LY75O60449 1722 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 SLITRK3O94933 977 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 FERP16591 822 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 ECE1P42892 770 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 SF3B2Q13435 895 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 RASGEF1CQ8N431 466 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 SLC30A5Q8TAD4 765 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 ATP8B4Q8TF62 1192 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 CTNNBL1Q8WYA6 563 aaPredicted RBP18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 ELMO3Q96BJ8 720 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 HOOK2Q96ED9 719 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 PCIF1Q9H4Z3 704 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 ACP6Q9NPH0 428 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 PHF20L1A8MW92 1017 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 DDX3YO15523 660 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 PSMC2P35998 433 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 DLG4P78352 724 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms