RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 MTRQ99707 1265 aa22.13■■□□□ 1.13
HIGD1A-201ENST00000321331 ERVK-5Q9HDB9 667 aa22.13■■□□□ 1.13
HIGD1A-201ENST00000321331 ST3GAL5Q9UNP4 418 aa22.13■■□□□ 1.13
HIGD1A-201ENST00000321331 ARID2Q68CP9 1835 aa22.13■■□□□ 1.13
HIGD1A-201ENST00000321331 STX6O43752 255 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 CCT6AP40227 531 aaKnown RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 RARRES1P49788 294 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 ARL6IP4Q66PJ3 421 aaKnown RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 ZNF410Q86VK4 478 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 FAM228AQ86W67 206 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 PSPC1Q8WXF1 523 aaKnown RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 ZNF668Q96K58 619 aaPredicted RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 GCOM2Q9BZD3 368 aaPredicted RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 BMP2KQ9NSY1 1161 aaPredicted RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 UPP2O95045 317 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 DARSP14868 501 aaKnown RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 KRT79Q5XKE5 535 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 POTEGQ6S5H5 508 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 SNX29Q8TEQ0 813 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 TSPYL2Q9H2G4 693 aaPredicted RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 ATP6V0A4Q9HBG4 840 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 DBR1Q9UK59 544 aaKnown RBP22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 MTMR6Q9Y217 621 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 INSL6Q9Y581 213 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 COL4A3BPQ9Y5P4 624 aa22.12■■□□□ 1.13
HIGD1A-201ENST00000321331 PDIA4P13667 645 aaKnown RBP22.11■■□□□ 1.13
HIGD1A-201ENST00000321331 TMEM143Q96AN5 459 aa22.11■■□□□ 1.13
HIGD1A-201ENST00000321331 NLRP4Q96MN2 994 aa22.11■■□□□ 1.13
HIGD1A-201ENST00000321331 GUCD1Q96NT3 240 aa22.11■■□□□ 1.13
HIGD1A-201ENST00000321331 INO80BQ9C086 356 aaPredicted RBP22.11■■□□□ 1.13
HIGD1A-201ENST00000321331 TMX1Q9H3N1 280 aa22.11■■□□□ 1.13
HIGD1A-201ENST00000321331 ZSCAN16Q9H4T2 348 aaPredicted RBP22.11■■□□□ 1.13
HIGD1A-201ENST00000321331 A0A087WZ62 844 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 DENND3A2RUS2 1198 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 ASAP2O43150 1006 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 RESTQ13127 1097 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 GRIN2CQ14957 1233 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 IL17AQ16552 155 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 PRPF31Q8WWY3 499 aaKnown RBP22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 LINC01599Q8WXQ3 324 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 YME1L1Q96TA2 773 aa22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 CDX2Q99626 313 aaPredicted RBP22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 FDXACB1Q9BRP7 624 aaPredicted RBP22.1■■□□□ 1.13
HIGD1A-201ENST00000321331 A0A087WWV3 80 aa22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 VWA3AA6NCI4 1184 aa22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 HTRA4P83105 476 aaPredicted RBP22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 SF3A1Q15459 793 aaKnown RBP22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 RTN4RL1Q86UN2 441 aaPredicted RBP22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 KSR1Q8IVT5 923 aa22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 XPNPEP1Q9NQW7 623 aa22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 C1orf112Q9NSG2 853 aa22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 RNF216Q9NWF9 866 aaPredicted RBP22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 KIAA1024Q9UPX6 916 aa22.09■■□□□ 1.13
HIGD1A-201ENST00000321331 LCHNA4D1U4 455 aa22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 ARHGEF35A5YM69 484 aa22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 USO1O60763 962 aaKnown RBP22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 STAG3L1P0CL83 205 aa22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 ZSCAN20P17040 1043 aaPredicted RBP22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 SFPQP23246 707 aaKnown RBP eCLIP22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 TAP1Q03518 808 aa22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 LAMTOR4Q0VGL1 99 aa22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 MXD4Q14582 209 aaPredicted RBP22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 ADAM2Q99965 735 aa22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 RGS18Q9NS28 235 aa22.08■■□□□ 1.12
HIGD1A-201ENST00000321331 PP2D1A8MPX8 630 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 SRGAP2CP0DJJ0 459 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 TTC3P53804 2025 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 ECM1Q16610 540 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 SLC24A5Q71RS6 500 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 NPAS4Q8IUM7 802 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 MCPH1Q8NEM0 835 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 AK8Q96MA6 479 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 DDX19AQ9NUU7 478 aaKnown RBP22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 STXBP5LQ9Y2K9 1186 aa22.07■■□□□ 1.12
HIGD1A-201ENST00000321331 CDC25AP30304 524 aa22.06■■□□□ 1.12
HIGD1A-201ENST00000321331 SARSP49591 514 aaKnown RBP22.06■■□□□ 1.12
HIGD1A-201ENST00000321331 TFDP1Q14186 410 aa22.06■■□□□ 1.12
HIGD1A-201ENST00000321331 MYLIPQ8WY64 445 aa22.06■■□□□ 1.12
HIGD1A-201ENST00000321331 LRFN2Q9ULH4 789 aa22.06■■□□□ 1.12
HIGD1A-201ENST00000321331 DNM3Q9UQ16 869 aa22.06■■□□□ 1.12
HIGD1A-201ENST00000321331 CHD9Q3L8U1 2897 aa22.06■■□□□ 1.12
HIGD1A-201ENST00000321331 LINC01553A4QN01 128 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 MGEA5O60502 916 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 CSDE1O75534 798 aaKnown RBP22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 FGFR4P22455 802 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 PADI6Q6TGC4 694 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 SRGAP1Q7Z6B7 1085 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 KCTD17Q8N5Z5 321 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 RNF149Q8NC42 400 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 SPRYD3Q8NCJ5 442 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 SP7Q8TDD2 431 aaPredicted RBP22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 GAS2L1Q99501 681 aaPredicted RBP22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 BHMT2Q9H2M3 363 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 PRDM12Q9H4Q4 367 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 IFT122Q9HBG6 1241 aa22.05■■□□□ 1.12
HIGD1A-201ENST00000321331 CDH23Q9H251 3354 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 ARHGEF15O94989 841 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 FOSL2P15408 326 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 IBSPP21815 317 aaPredicted RBP22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 ARL2P36404 184 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms