RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CNOT8Q9UFF9 292 aaKnown RBP17.84■□□□□ 0.45
PACS1-201ENST00000320580 PNMA3Q9UL41 463 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 USP31Q70CQ4 1352 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 RHOBTB3O94955 611 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 ZWINTO95229 277 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 AFPP02771 609 aaKnown RBP17.84■□□□□ 0.45
PACS1-201ENST00000320580 SHBGP04278 402 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 PGM1P36871 562 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 GIMAP8Q8ND71 665 aaPredicted RBP17.84■□□□□ 0.45
PACS1-201ENST00000320580 NMD3Q96D46 503 aaKnown RBP17.84■□□□□ 0.45
PACS1-201ENST00000320580 A0A087X0T9 212 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 FAM228BP0C875 321 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 NCALDP61601 193 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 DNAJC3Q13217 504 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 CCDC137Q6PK04 289 aaKnown RBP17.84■□□□□ 0.45
PACS1-201ENST00000320580 COL23A1Q86Y22 540 aaPredicted RBP17.84■□□□□ 0.45
PACS1-201ENST00000320580 RBBP8NLQ8NC74 664 aaPredicted RBP17.84■□□□□ 0.45
PACS1-201ENST00000320580 MAML1Q92585 1016 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 PACSIN1Q9BY11 444 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 EDEM3Q9BZQ6 932 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TMOD2Q9NZR1 351 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TRAF3IP3Q9Y228 551 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 DDAH1O94760 285 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TMCC1O94876 653 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 ITGA4P13612 1032 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 AP2B1P63010 937 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 ZCWPW2Q504Y3 356 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 SNX30Q5VWJ9 437 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TMTC3Q6ZXV5 915 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 JAMLQ86YT9 394 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TRIM42Q8IWZ5 723 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 ADAM33Q9BZ11 813 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 RMI1Q9H9A7 625 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 ANAPC4Q9UJX5 808 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 SH3BP1Q9Y3L3 701 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 LIN7AO14910 233 aaPredicted RBP17.83■□□□□ 0.45
PACS1-201ENST00000320580 LRRN2O75325 713 aa17.83■□□□□ 0.45
PACS1-201ENST00000320580 PEX5P50542 639 aa17.83■□□□□ 0.45
PACS1-201ENST00000320580 KPNB1Q14974 876 aaKnown RBP17.83■□□□□ 0.45
PACS1-201ENST00000320580 IRGCQ6NXR0 463 aa17.83■□□□□ 0.45
PACS1-201ENST00000320580 SNX3O60493 162 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 TFAP4Q01664 338 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 MED21Q13503 144 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.44
PACS1-201ENST00000320580 TAB3Q8N5C8 712 aaPredicted RBP17.83■□□□□ 0.44
PACS1-201ENST00000320580 FBXO25Q8TCJ0 367 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 CDK17Q00537 523 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 TXNRD1Q16881 649 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 TRIM9Q9C026 710 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 UBN1Q9NPG3 1134 aa17.83■□□□□ 0.44
PACS1-201ENST00000320580 PCDH11XQ9BZA7 1347 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 PCDH11YQ9BZA8 1340 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 CYP2D7A0A087X1C5 515 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 DHX34Q14147 1143 aaKnown RBP17.82■□□□□ 0.44
PACS1-201ENST00000320580 GJA10Q969M2 543 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 CLMNQ96JQ2 1002 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 PPARGC1AQ9UBK2 798 aaKnown RBP17.82■□□□□ 0.44
PACS1-201ENST00000320580 OVOS2A0A0G2JMS6 1433 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 CYLC2Q14093 348 aaPredicted RBP17.82■□□□□ 0.44
PACS1-201ENST00000320580 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.82■□□□□ 0.44
PACS1-201ENST00000320580 O00370 1275 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 LAD1O00515 517 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 CCDC22O60826 627 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 SUPT3HO75486 399 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 ZNF189O75820 626 aaPredicted RBP17.82■□□□□ 0.44
PACS1-201ENST00000320580 BCRP11274 1271 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 CHRNA3P32297 505 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 TTI2Q6NXR4 508 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 RGS9BPQ6ZS82 235 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 CTAGE3PQ8IX95 158 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 PNMA1Q8ND90 353 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.82■□□□□ 0.44
PACS1-201ENST00000320580 SMYD3Q9H7B4 428 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 NPHS2Q9NP85 383 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 GCNT4Q9P109 453 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 JAG2Q9Y219 1238 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 PPIP5K2O43314 1243 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 UNC13DQ70J99 1090 aa17.82■□□□□ 0.44
PACS1-201ENST00000320580 MMADHCQ9H3L0 296 aaPredicted RBP17.82■□□□□ 0.44
PACS1-201ENST00000320580 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 MAP3K21Q5TCX8 1036 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 MAP3K15Q6ZN16 1313 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 DCDC2CA8MYV0 355 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 ATP6V1C1P21283 382 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 EPHB2P29323 1055 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 ARFIP2P53365 341 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 KCNH2Q12809 1159 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 TMCO4Q5TGY1 634 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 MEI1Q5TIA1 1274 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 TRIML2Q8N7C3 387 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 ANLNQ9NQW6 1124 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 ZBTB17Q13105 803 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 THOC5Q13769 683 aaKnown RBP17.81■□□□□ 0.44
PACS1-201ENST00000320580 ATG9AQ7Z3C6 839 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 NDNQ99608 321 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 SEMA4AQ9H3S1 761 aa17.81■□□□□ 0.44
PACS1-201ENST00000320580 PTDSS1P48651 473 aaKnown RBP17.8■□□□□ 0.44
PACS1-201ENST00000320580 NTRK3Q16288 839 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms