RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 INPPL1O15357 1258 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 ZNF623O75123 536 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 SRGAP2BP0DMP2 458 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 EIF4BP23588 611 aaKnown RBP9.48□□□□□ -0.89
MSL3-201ENST00000312196 DNM2P50570 870 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 RAB27AP51159 221 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 GPC3P51654 580 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 CCT2P78371 535 aaKnown RBP9.48□□□□□ -0.89
MSL3-201ENST00000312196 PRKCEQ02156 737 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 SPRED2Q7Z698 418 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 SPPL3Q8TCT6 385 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 KHSRPQ92945 711 aaKnown RBP eCLIP9.48□□□□□ -0.891e-6■■□□□ 12
MSL3-201ENST00000312196 GTF3C6Q969F1 213 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 GCOM2Q9BZD3 368 aaPredicted RBP9.48□□□□□ -0.89
MSL3-201ENST00000312196 ATP6V0A4Q9HBG4 840 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 NCOA5Q9HCD5 579 aaKnown RBP9.48□□□□□ -0.89
MSL3-201ENST00000312196 BRMS1Q9HCU9 246 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 DACT1Q9NYF0 836 aa9.48□□□□□ -0.89
MSL3-201ENST00000312196 DDX25Q9UHL0 483 aaKnown RBP9.48□□□□□ -0.89
MSL3-201ENST00000312196 MRPL42Q9Y6G3 142 aaKnown RBP9.48□□□□□ -0.89
MSL3-201ENST00000312196 CCDC194A0A1B0GVG4 234 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 BAG4O95429 457 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 SSTR3P32745 418 aaPredicted RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 PPM1AP35813 382 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 PTPN5P54829 565 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 EFCAB12Q6NXP0 572 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 SRGAP1Q7Z6B7 1085 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 ZNF598Q86UK7 904 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 TRAPPC12Q8WVT3 735 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 TCP11Q8WWU5 503 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 ZSCAN31Q96LW9 406 aaPredicted RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 MRPL9Q9BYD2 267 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 ANKEF1Q9NU02 776 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 RNF19AQ9NV58 838 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 TPCN1Q9ULQ1 816 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 PCDHB12Q9Y5F1 795 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 STK24Q9Y6E0 443 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 TCF20Q9UGU0 1960 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 CTDNEP1O95476 244 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 HOXB8P17481 243 aaPredicted RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 QARSP47897 775 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 TMCO2Q7Z6W1 182 aaPredicted RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 MRPL10Q7Z7H8 261 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 CKAP2LQ8IYA6 745 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 GPR65Q8IYL9 337 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 CNNM3Q8NE01 707 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 SUSD6Q92537 303 aa9.47□□□□□ -0.89
MSL3-201ENST00000312196 PRRC2BQ5JSZ5 2229 aaKnown RBP9.47□□□□□ -0.89
MSL3-201ENST00000312196 A0A0U1RQF3 1178 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 DDX39AO00148 427 aaKnown RBP9.46□□□□□ -0.9
MSL3-201ENST00000312196 GRM6O15303 877 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 AXLP30530 894 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 KRT2P35908 639 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 POLGP54098 1239 aaPredicted RBP9.46□□□□□ -0.9
MSL3-201ENST00000312196 TBC1D8BQ0IIM8 1120 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 OTUD6AQ7L8S5 288 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 ECHDC2Q86YB7 292 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 SMRP1Q8NCR6 262 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 ADAM2Q99965 735 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 NFKBIZQ9BYH8 718 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 DHX33Q9H6R0 707 aaKnown RBP9.46□□□□□ -0.9
MSL3-201ENST00000312196 CWH43Q9H720 699 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 CLDND1Q9NY35 253 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 RAPGEFL1Q9UHV5 662 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 CNTNAP2Q9UHC6 1331 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 ARID2Q68CP9 1835 aa9.46□□□□□ -0.9
MSL3-201ENST00000312196 DENND3A2RUS2 1198 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 MGEA5O60502 916 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 ZSCAN20P17040 1043 aaPredicted RBP9.45□□□□□ -0.9
MSL3-201ENST00000312196 IRS1P35568 1242 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 AK2P54819 239 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 GIT2Q14161 759 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 LRRC43Q8N309 656 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 COLGALT1Q8NBJ5 622 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 CASD1Q96PB1 797 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
MSL3-201ENST00000312196 CDHR5Q9HBB8 845 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 ORC3Q9UBD5 711 aaPredicted RBP9.45□□□□□ -0.9
MSL3-201ENST00000312196 SZT2Q5T011 3432 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 TTC28Q96AY4 2481 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 UPP2O95045 317 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 PAPLNO95428 1278 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 TDP2O95551 362 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 ITGB1P05556 798 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
MSL3-201ENST00000312196 SFPQP23246 707 aaKnown RBP eCLIP9.45□□□□□ -0.9
MSL3-201ENST00000312196 ZXDAP98168 799 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 NHLH1Q02575 133 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 SPIRE1Q08AE8 756 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 KCNC3Q14003 757 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 UGCGQ16739 394 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 DUSP6Q16828 381 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 FAM117BQ6P1L5 589 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 TMEM40Q8WWA1 233 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 RHOBTB2Q9BYZ6 727 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
MSL3-201ENST00000312196 NGRNQ9NPE2 291 aaKnown RBP9.45□□□□□ -0.9
MSL3-201ENST00000312196 UBN1Q9NPG3 1134 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms