RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 APOBEC2Q9Y235 224 aaKnown RBP15.2■□□□□ 0.02
COL1A2-201ENST00000297268 GNGT2O14610 69 aa15.2■□□□□ 0.02
COL1A2-201ENST00000297268 SRGNP10124 158 aa15.2■□□□□ 0.02
COL1A2-201ENST00000297268 HSPA9P38646 679 aaKnown RBP15.2■□□□□ 0.02
COL1A2-201ENST00000297268 KIF22Q14807 665 aa15.2■□□□□ 0.02
COL1A2-201ENST00000297268 LRIG3Q6UXM1 1119 aa15.2■□□□□ 0.02
COL1A2-201ENST00000297268 PAGR1Q9BTK6 254 aa15.2■□□□□ 0.02
COL1A2-201ENST00000297268 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
COL1A2-201ENST00000297268 AGPAT5Q9NUQ2 364 aa15.2■□□□□ 0.02
COL1A2-201ENST00000297268 PSMD14O00487 310 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 WDR46O15213 610 aaKnown RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 KITP10721 976 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 PSMA2P25787 234 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 TFDP1Q14186 410 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 HLFQ16534 295 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 GLYCTKQ8IVS8 523 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 SH3RF3Q8TEJ3 882 aaPredicted RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 HSPH1Q92598 858 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 FAM161BQ96MY7 647 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 SLC38A10Q9HBR0 1119 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 TLR3O15455 904 aaKnown RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 HSPA4LO95757 839 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 FTLP02792 175 aaPredicted RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 LSP1P33241 339 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 CORO7P57737 925 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 IGBP1P78318 339 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 BYSLQ13895 437 aaKnown RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 KLHL38Q2WGJ6 581 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 ERICH1Q86X53 443 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 HNRNPLLQ8WVV9 542 aaKnown RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 RFFLQ8WZ73 363 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 CLTCL1P53675 1640 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 TET3O43151 1660 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 ESYT2A0FGR8 921 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 PHF20L1A8MW92 1017 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 PEX3P56589 373 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 DYNC1I2Q13409 638 aaKnown RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 ZNF746Q6NUN9 644 aaPredicted RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 RGS9BPQ6ZS82 235 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 SPATA21Q7Z572 469 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 TRIM59Q8IWR1 403 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.19■□□□□ 0.021e-9■■■■■ 98.2
COL1A2-201ENST00000297268 SNF8Q96H20 258 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 SUDS3Q9H7L9 328 aaPredicted RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 BSDC1Q9NW68 430 aaPredicted RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 TCP11X1B4DZS4 312 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 M0QZ92 97 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 CHN1P15882 459 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 GRM4Q14833 912 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 HP1BP3Q5SSJ5 553 aaPredicted RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 SCARA5Q6ZMJ2 495 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 REXO1L1PQ8IX06 675 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 ADSSL1Q8N142 457 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 GRAMD1AQ96CP6 724 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 RBM12Q9NTZ6 932 aaKnown RBP15.19■□□□□ 0.02
COL1A2-201ENST00000297268 SMARCAL1Q9NZC9 954 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 MID2Q9UJV3 735 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 SUFUQ9UMX1 484 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 FHOD1Q9Y613 1164 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 CPDO75976 1380 aa15.19■□□□□ 0.02
COL1A2-201ENST00000297268 INO80B-WBP1J3KQ70 363 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 GYPCP04921 128 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 DEUP1Q05D60 604 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 MKRN3Q13064 507 aaKnown RBP15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ZBTB33Q86T24 672 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 INO80BQ9C086 356 aaPredicted RBP15.18■□□□□ 0.02
COL1A2-201ENST00000297268 INTS2Q9H0H0 1204 aaKnown RBP15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ANKARQ7Z5J8 1434 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 FAM205CA6NFA0 338 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 RASSF10A6NK89 507 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 KRT14P02533 472 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ELF1P32519 619 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 AP2B1P63010 937 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ORC2Q13416 577 aaPredicted RBP15.18■□□□□ 0.02
COL1A2-201ENST00000297268 SCARF1Q14162 830 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 NCAPHQ15003 741 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
COL1A2-201ENST00000297268 TTC1Q99614 292 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 CFAP69A5D8W1 941 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 PFDN6O15212 129 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ABCD1P33897 745 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
COL1A2-201ENST00000297268 MIS18BP1Q6P0N0 1132 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ZIM3Q96PE6 472 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 WNT8AQ9H1J5 351 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 PCDHA6Q9UN73 950 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 PCDHA8Q9Y5H6 950 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 SLC4A7Q9Y6M7 1214 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 H2AFXP16104 143 aaPredicted RBP15.18■□□□□ 0.02
COL1A2-201ENST00000297268 MTERF2Q49AM1 385 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 ENGASEQ8NFI3 743 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 OR2W6PQ8NHA6 318 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 SEC16BQ96JE7 1060 aa15.18■□□□□ 0.02
COL1A2-201ENST00000297268 NDE1Q9NXR1 346 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms