RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ABLIM3O94929 683 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 MT-CO1P00395 513 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 CELA3BP08861 270 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 MYBL2P10244 700 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 IL13P35225 146 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 GPR15P49685 360 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 TOP3AQ13472 1001 aaPredicted RBP6□□□□□ -1.45
CCDC54-201ENST00000261058 TRIM25Q14258 630 aaKnown RBP6□□□□□ -1.45
CCDC54-201ENST00000261058 EIF4HQ15056 248 aaKnown RBP6□□□□□ -1.45
CCDC54-201ENST00000261058 KCNA10Q16322 511 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 PTPN21Q16825 1174 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 UGT8Q16880 541 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 CPEB4Q17RY0 729 aaKnown RBP eCLIP6□□□□□ -1.45
CCDC54-201ENST00000261058 CCDC178Q5BJE1 867 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 CT83Q5H943 113 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 TMEM240Q5SV17 173 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 GRAMD4Q6IC98 578 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 OR5AN1Q8NGI8 311 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 ZNF526Q8TF50 670 aaPredicted RBP6□□□□□ -1.45
CCDC54-201ENST00000261058 TGFBRAP1Q8WUH2 860 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 JDP2Q8WYK2 163 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 FERMT2Q96AC1 680 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 EAF2Q96CJ1 260 aaPredicted RBP6□□□□□ -1.45
CCDC54-201ENST00000261058 RAX2Q96IS3 184 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 YTHDC1Q96MU7 727 aaKnown RBP6□□□□□ -1.45
CCDC54-201ENST00000261058 PRSS50Q9UI38 385 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 CROTQ9UKG9 612 aa6□□□□□ -1.45
CCDC54-201ENST00000261058 ST20-MTHFSA0A0A6YYL1 179 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 H0Y858 1186 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 AKAP10O43572 662 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 CUTAO60888 179 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 AGXTP21549 392 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 POLD1P28340 1107 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 MAP3K12Q12852 859 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 PIN1Q13526 163 aaPredicted RBP5.99□□□□□ -1.45
CCDC54-201ENST00000261058 PCBP2Q15366 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
CCDC54-201ENST00000261058 ZNF385BQ569K4 471 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 CCDC62Q6P9F0 684 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 SLC38A3Q99624 504 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 KATNBL1Q9H079 304 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 KCTD10Q9H3F6 313 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 FTSJ1Q9UET6 329 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 EID1Q9Y6B2 187 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 A0A0A6YYK5 440 aaPredicted RBP5.99□□□□□ -1.45
CCDC54-201ENST00000261058 A0A0G2JNJ9 132 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 E2F8A0AVK6 867 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 RFXAPO00287 272 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 MAFGO15525 162 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 SEC24DO94855 1032 aaPredicted RBP5.99□□□□□ -1.45
CCDC54-201ENST00000261058 APOL3O95236 402 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 MTHFD2P13995 350 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 RAB27AP51159 221 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 ANTXR2P58335 489 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 MUM1Q2TAK8 710 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 WDR72Q3MJ13 1102 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 TRIM68Q6AZZ1 485 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 PGM2L1Q6PCE3 622 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 ZBTB46Q86UZ6 589 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 CDYL2Q8N8U2 506 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 TP53I13Q8NBR0 393 aaPredicted RBP5.99□□□□□ -1.45
CCDC54-201ENST00000261058 OR14C36Q8NHC7 312 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 TSPEARQ8WU66 669 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 HOOK2Q96ED9 719 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 SOX7Q9BT81 388 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 KRTAP4-2Q9BYR5 136 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 CDH19Q9H159 772 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 NTMQ9P121 344 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 Q9UFV3 132 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHB6Q9Y5E3 794 aa5.99□□□□□ -1.45
CCDC54-201ENST00000261058 PCDH8O95206 1070 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 PARNO95453 639 aaKnown RBP5.98□□□□□ -1.45
CCDC54-201ENST00000261058 LPLP06858 475 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 ETV4P43268 484 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 JAG1P78504 1218 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 SRSF2Q01130 221 aaKnown RBP5.98□□□□□ -1.45
CCDC54-201ENST00000261058 DGKDQ16760 1214 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 ZNF827Q17R98 1081 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 TRMT10BQ6PF06 316 aaKnown RBP5.98□□□□□ -1.45
CCDC54-201ENST00000261058 TTLL7Q6ZT98 887 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 REXO1L1PQ8IX06 675 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 AMOTL1Q8IY63 956 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 LINC01356Q8N9X3 169 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 NUDT10Q8NFP7 164 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 NKD2Q969F2 451 aaPredicted RBP5.98□□□□□ -1.45
CCDC54-201ENST00000261058 NUDT11Q96G61 164 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 AJUBAQ96IF1 538 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 RTFDC1Q9BY42 306 aaPredicted RBP5.98□□□□□ -1.45
CCDC54-201ENST00000261058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.98□□□□□ -1.45
CCDC54-201ENST00000261058 DNAJC28Q9NX36 388 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 MKS1Q9NXB0 559 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 G3BP2Q9UN86 482 aaKnown RBP5.98□□□□□ -1.45
CCDC54-201ENST00000261058 GPR45Q9Y5Y3 372 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 CDY2AQ9Y6F7 541 aa5.98□□□□□ -1.45
CCDC54-201ENST00000261058 KLHL33A6NCF5 533 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 DDX3XO00571 662 aaKnown RBP eCLIP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 RECQLP46063 649 aaPredicted RBP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 AFF3P51826 1226 aaKnown RBP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 LGALS4P56470 323 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 ODF1Q14990 250 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 ANO4Q32M45 955 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms