RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 NUP58Q9BVL2 599 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 ZHX1Q9UKY1 873 aaPredicted RBP24.9■■□□□ 1.58
CDX1-201ENST00000231656 GABRQQ9UN88 632 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.9■■□□□ 1.58
CDX1-201ENST00000231656 BACH1O14867 736 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 ZNF862O60290 1169 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 XRCC5P13010 732 aaKnown RBP24.9■■□□□ 1.58
CDX1-201ENST00000231656 CYP2C19P33261 490 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 KLK7P49862 253 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 ETF1P62495 437 aaKnown RBP24.9■■□□□ 1.58
CDX1-201ENST00000231656 PRAMEF19Q5SWL8 479 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 GJC2Q5T442 439 aaPredicted RBP24.9■■□□□ 1.58
CDX1-201ENST00000231656 SPATA33Q96N06 139 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 GPR20Q99678 358 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 NDST4Q9H3R1 872 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 DBR1Q9UK59 544 aaKnown RBP24.9■■□□□ 1.58
CDX1-201ENST00000231656 COL4A3BPQ9Y5P4 624 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 ADGRG1Q9Y653 693 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 CEP350Q5VT06 3117 aa24.89■■□□□ 1.58
CDX1-201ENST00000231656 IGSF9BQ9UPX0 1349 aa24.89■■□□□ 1.58
CDX1-201ENST00000231656 DKC1O60832 514 aaKnown RBP eCLIP24.89■■□□□ 1.57
CDX1-201ENST00000231656 TBCAO75347 108 aaKnown RBP24.89■■□□□ 1.57
CDX1-201ENST00000231656 GAP43P17677 238 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 HOXD13P35453 343 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 FLT3LGP49771 235 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 ARHGAP1Q07960 439 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 BMT2Q1RMZ1 405 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 EDRF1Q3B7T1 1238 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 FIGNQ5HY92 759 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 SYT10Q6XYQ8 523 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 PPP4R3CPQ6ZMV5 832 aa24.89■■□□□ 1.57
CDX1-201ENST00000231656 LUC7L2Q9Y383 392 aaKnown RBP24.89■■□□□ 1.57
CDX1-201ENST00000231656 MAFBQ9Y5Q3 323 aaPredicted RBP24.89■■□□□ 1.57
CDX1-201ENST00000231656 NOP56O00567 594 aaKnown RBP24.88■■□□□ 1.57
CDX1-201ENST00000231656 CCDC175P0C221 793 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 TCF7P36402 384 aaPredicted RBP24.88■■□□□ 1.57
CDX1-201ENST00000231656 IRF5Q13568 498 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 IQSEC1Q6DN90 963 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 CYP26C1Q6V0L0 522 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 TRMT1LQ7Z2T5 733 aaKnown RBP24.88■■□□□ 1.57
CDX1-201ENST00000231656 OR8K1Q8NGG5 319 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 ZNF302Q9NR11 478 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 OLFML3Q9NRN5 406 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 CASP8AP2Q9UKL3 1982 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 GH1P01241 217 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 MYBP10242 640 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 RARRES1P49788 294 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 MARSP56192 900 aaKnown RBP24.88■■□□□ 1.57
CDX1-201ENST00000231656 PRKCZQ05513 592 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 PCYT2Q99447 389 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 SIK3Q9Y2K2 1263 aa24.88■■□□□ 1.57
CDX1-201ENST00000231656 PHLPP2Q6ZVD8 1323 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 MYH11P35749 1972 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 ARHGEF35A5YM69 484 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 TMEM150BA6NC51 233 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 GPR25O00155 361 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 STBD1O95210 358 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 GNA14O95837 355 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 ZNF865P0CJ78 1059 aaPredicted RBP24.87■■□□□ 1.57
CDX1-201ENST00000231656 SMPD1P17405 629 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 LAMC2Q13753 1193 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 DUSP28Q4G0W2 176 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 UTP14CQ5TAP6 766 aaKnown RBP24.87■■□□□ 1.57
CDX1-201ENST00000231656 ANO5Q75V66 913 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 MRPL44Q9H9J2 332 aaKnown RBP24.87■■□□□ 1.57
CDX1-201ENST00000231656 KCND2Q9NZV8 630 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 TRAF3IP3Q9Y228 551 aa24.87■■□□□ 1.57
CDX1-201ENST00000231656 A0A1W2PQJ5 194 aa24.86■■□□□ 1.57
CDX1-201ENST00000231656 PRKCEQ02156 737 aa24.86■■□□□ 1.57
CDX1-201ENST00000231656 KNOP1Q1ED39 458 aaKnown RBP24.86■■□□□ 1.57
CDX1-201ENST00000231656 EMID1Q96A84 441 aaPredicted RBP24.86■■□□□ 1.57
CDX1-201ENST00000231656 ANKEF1Q9NU02 776 aa24.86■■□□□ 1.57
CDX1-201ENST00000231656 ADCY6O43306 1168 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 CTIFO43310 598 aaKnown RBP24.85■■□□□ 1.57
CDX1-201ENST00000231656 TRIM21P19474 475 aaKnown RBP24.85■■□□□ 1.57
CDX1-201ENST00000231656 CD99L2Q8TCZ2 262 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 AFAP1L1Q8TED9 768 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 IQCDQ96DY2 449 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 POLD4Q9HCU8 107 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 SAGE1Q9NXZ1 904 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 ARID2Q68CP9 1835 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 PRPF6O94906 941 aaKnown RBP24.85■■□□□ 1.57
CDX1-201ENST00000231656 FAM13AO94988 1023 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 HSPA6P17066 643 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 ATP4AP20648 1035 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 STAT5BP51692 787 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 ZNF131P52739 623 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 ZBED6P86452 979 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 TNFAIP2Q03169 654 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 CCDC40Q4G0X9 1142 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 FAM160B1Q5W0V3 765 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 WDR59Q6PJI9 974 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 PADI6Q6TGC4 694 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 OTUD6AQ7L8S5 288 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 SH2D3AQ9BRG2 576 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 AGPAT5Q9NUQ2 364 aa24.85■■□□□ 1.57
CDX1-201ENST00000231656 HTTP42858 3142 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 FANCGO15287 622 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 LGR5O75473 907 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 NPEPPSP55786 919 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms