RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ifi207E9Q3L4 978 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Psmd1Q3TXS7 953 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ankrd13dQ6PD24 605 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Zbed4Q80WQ9 1168 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Nucks1Q80XU3 234 aaKnown RBP13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 P2ry10Q8BFU7 328 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Epn2Q8CHU3 595 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Sumf1Q8R0F3 372 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Lbhd1A0A087WPA0 259 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Atp6v1aP50516 617 aaKnown RBP13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Frmd8Q3UFK8 466 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Dph1Q5NCQ5 438 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 HnrnpdQ60668 355 aaKnown RBP13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Lamc2Q61092 1191 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ppp2r5aQ6PD03 486 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 E2f7Q6S7F2 904 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gramd4Q8CB44 633 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Klhl36Q8R124 613 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 CrygnQ8VHL5 183 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Q9DAQ4 598 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Irx5Q9JKQ4 484 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fam171a1A2ATK9 892 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Usp17ldG5E8G2 545 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Usp17lcG5E8I7 545 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Il13ra2O88786 383 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Wfs1P56695 890 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Irx1P81068 480 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fgfr4Q03142 799 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Chrna5Q2MKA5 467 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Oca2Q62052 833 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ints2Q80UK8 1198 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 NrcamQ810U4 1256 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Lrrc4cQ8C031 640 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 PhykplQ8R1K4 467 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 1700109H08RikQ9D9C0 210 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Hebp1Q9R257 190 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Osbpl7A2A716 963 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Klhdc7aA2APT9 773 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Slc35g2D3YVE8 412 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Cfap70D3YVL2 1141 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Shox2P70390 331 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 HelqQ2VPA6 1069 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 MlxipQ2VPU4 917 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 BC051142Q3V0M8 400 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ttyh3Q6P5F7 524 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Q8BGD0 127 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Plcg2Q8CIH5 1265 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ago4Q8CJF8 861 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gle1Q8R322 699 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Pdxdc1Q99K01 787 aaKnown RBP13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 PlekQ9JHK5 350 aaKnown RBP13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ptf1aQ9QX98 324 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Cyp2ab1S4R196 498 aa13.98□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gm4907B1AXB9 411 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Barx2O08686 283 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Pdk4O70571 412 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ccdc84Q4VA36 332 aaKnown RBP13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 1810065E05RikQ5NC41 235 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Adad1Q5SUE7 619 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ccdc25Q78PG9 208 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Tarsl2Q8BLY2 790 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 RalylQ8BTF8 293 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Dennd1aQ8K382 1016 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 WaslQ91YD9 501 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ttc5Q99LG4 440 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 IscuQ9D7P6 168 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ubiad1Q9DC60 336 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Scgb2b20Q9JI02 112 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Rnf4Q9QZS2 194 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Cacna2d3Q9Z1L5 1091 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Flvcr1B2RXV4 560 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Rasal2E9PW37 1286 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gimap9G3X987 291 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gsg1l2M0QWL6 290 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Idh1O88844 414 aaKnown RBP13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Serpina1aP07758 413 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 CatspereP0DP43 985 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 VimP20152 466 aaKnown RBP13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Epha3P29319 983 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Serpina1cQ00896 412 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Serpina1dQ00897 413 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 YdjcQ14BV6 310 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ppp2r5cQ60996 524 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Swap70Q6A028 585 aaKnown RBP13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Q8BGC1 442 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Depdc1bQ8BH88 529 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 HhatQ8BMT9 499 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Btbd7Q8CFE5 1130 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Slc5a4aQ9ET37 656 aa13.97□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fam205aA2APU8 1308 aa13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Kif5cP28738 956 aaKnown RBP13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fam207aP58468 219 aaKnown RBP13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ncf1Q09014 390 aa13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Grik5Q61626 979 aa13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Foxo6Q70KY4 559 aa13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Cyp26b1Q811W2 512 aa13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ppfia2Q8BSS9 1257 aa13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Yars2Q8BYL4 472 aaKnown RBP13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 PaoxQ8C0L6 504 aa13.96□□□□□ -0.17
Nup88-203ENSMUST00000108531 Syngap1F6SEU4 1340 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 87.5 ms