RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Ndufa5Q9CPP6 116 aa11.56□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ap2b1Q9DBG3 937 aa11.56□□□□□ -0.56
Trim61-201ENSMUST00000078409 Plod1Q9R0E2 728 aa11.56□□□□□ -0.56
Trim61-201ENSMUST00000078409 Frmpd4A2AFR3 1320 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ampd3O08739 766 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ptpn20O55082 426 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gdi1P50396 447 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ptgs2Q05769 604 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Fam83hQ148V8 1209 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Uri1Q3TLD5 531 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Limch1Q3UH68 1057 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ttf1Q62187 859 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Cyp2c29Q64458 490 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 PicalmQ7M6Y3 660 aaKnown RBP11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Stkld1Q80YS9 662 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Thop1Q8C1A5 687 aaKnown RBP11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gpc3Q8CFZ4 579 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 LgsnQ8CIX8 563 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Nup133Q8R0G9 1155 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Zc3h10Q8R205 435 aaKnown RBP11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Atl3Q91YH5 541 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gins2Q9D600 185 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Krt85Q9Z2T6 507 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Nphp3Q7TNH6 1325 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Lamb1P02469 1786 aa11.55□□□□□ -0.56
Trim61-201ENSMUST00000078409 Zfp362B1ASA5 418 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 NuggcD3YWJ0 796 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Smpd5D6MZJ6 483 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Bnc1O35914 961 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Hcn4O70507 1186 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Prl7d1P04769 244 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Phkg1P07934 388 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Pax7P47239 503 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gcnt1Q09324 428 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Pls1Q3V0K9 630 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Serpina3gQ5I2A0 440 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 HarsQ61035 509 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Krt15Q61414 452 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Snx13Q6PHS6 957 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Prl3a1Q78Y73 227 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Prpf18Q8BM39 342 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Tigd4Q8BUZ3 513 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 ScaiQ8C8N2 606 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Dis3l2Q8CI75 870 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Sirt5Q8K2C6 310 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Taf5lQ91WQ5 589 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Abt1Q9QYL7 269 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Zkscan7E9PVW1 718 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Pitpnm1O35954 1243 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Casp8O89110 480 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 MycP01108 439 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Stat5bP42232 786 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 TbcaP48428 108 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Usp5P56399 858 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Usp25P57080 1055 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Cplx1P63040 134 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 1700057G04RikQ3V0U0 232 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ndufaf2Q59J78 168 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Brsk1Q5RJI5 778 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Snd1Q78PY7 910 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ubap2lQ80X50 1107 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ccdc172Q810N9 267 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Cyp26b1Q811W2 512 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Q8C1R3 189 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Q8CD60 292 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 CopaQ8CIE6 1224 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 HscbQ8K3A0 234 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Sh3kbp1Q8R550 709 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Rbm47Q91WT8 590 aaKnown RBP11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Prb1Q91X93 504 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Prl7c1Q9CRB5 251 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Sesn3Q9CYP7 492 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Q9D2X8 372 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Rabgef1Q9JM13 491 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Apobec2Q9WV35 224 aa11.54□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gm10639E9Q6L7 222 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ppp1r9aH3BJD6 1292 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 ThbdP15306 577 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Sstr3P30935 428 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ankrd27Q3UMR0 1048 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Srrm1Q52KI8 946 aaKnown RBP11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Pdcd4Q61823 469 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Rhbdf1Q6PIX5 856 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ush1gQ80T11 461 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Arhgef38Q80VK6 770 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 RimklbQ80WS1 387 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 GlyctkQ8QZY2 523 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Slc13a3Q91Y63 600 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Prmt3Q922H1 532 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ska1Q9CPV1 254 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 2310002L09RikQ9D7L5 217 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Q9D9S1 216 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Myh14Q6URW6 2000 aa11.53□□□□□ -0.56
Trim61-201ENSMUST00000078409 Veph1A1A535 833 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Ppfia1B2RXQ2 1266 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gm9857F7CXR1 130 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gm5814J3QP80 125 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Psma3O70435 255 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Clec11aO88200 328 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Cct5P80316 541 aaKnown RBP11.52□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms