RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Kcnu1O54982 1121 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Muc3aQ3U5A2 218 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 EsrrbQ61539 433 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Sin3bQ62141 1098 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Klra3Q64329 266 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Senp6Q6P7W0 1132 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Raver2Q7TPD6 673 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Btnl9Q8BJE2 536 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Q8BWG4 1187 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Vps52Q8C754 723 aaKnown RBP11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Matr3Q8K310 846 aaKnown RBP11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Slc14a1Q8VHL0 384 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tdrd1Q99MV1 1172 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Smco2Q9DA21 347 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Fthl17aQ9DAX0 182 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 PigoQ9JJI6 1093 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tnip1Q9WUU8 647 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 MyocO70624 490 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 D1Pas1P16381 660 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Rapgef1Q3UHC1 1224 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Atp13a4Q5XF90 1193 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 P4ha1Q60715 534 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tfe3Q64092 572 aaKnown RBP11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Mcf2lQ64096 1149 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Msantd2Q6NZR2 559 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Spata2Q8K004 515 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 NkapQ9D0F4 415 aaKnown RBP11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 PdiltQ9DAN1 588 aa11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Cse1lQ9ERK4 971 aaKnown RBP11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tjp2Q9Z0U1 1167 aaKnown RBP11.92□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Cntnap5cQ0V8T7 1305 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Mageb2A2AHM0 380 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Zfpm1O35615 995 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Got1P05201 413 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Lmnb2P21619 596 aaKnown RBP11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Phactr1Q2M3X8 580 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Mier3Q3UHF3 551 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Fdxacb1Q3UY23 622 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Phactr4Q501J7 694 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Exoc3Q6KAR6 755 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Lrig3Q6P1C6 1117 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Nipa1Q8BHK1 323 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 3830417A13RikQ8BQJ2 303 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Ythdf3Q8BYK6 585 aaKnown RBP11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Ssr1Q9CY50 286 aaKnown RBP11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Grtp1Q9D3N8 359 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Dydc1Q9D9T0 175 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Cntnap2Q9CPW0 1332 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Sema4dO09126 861 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 PrphP15331 475 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Cyp11b2P15539 500 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Gna15P30678 374 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Wnt10bP48614 389 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Cep126Q0VBV7 1103 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Psmd1Q3TXS7 953 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 4933427I04RikQ3V053 235 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Sycp1Q62209 993 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Sp4Q62445 782 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Pde1cQ64338 706 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Ccdc148Q6P5U8 527 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Ppp2r5aQ6PD03 486 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Zfp341Q6PGC9 846 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Fnbp1Q80TY0 616 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tgm5Q9D7I9 724 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Kcnh7Q9ER47 1195 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 EmcnQ9R0H2 261 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Extl3Q9WVL6 918 aa11.91□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Ttc13A0A1L1SSC7 844 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Ccdc78D3Z5T1 437 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Dhx15O35286 795 aaKnown RBP11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 GcP21614 476 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 NfibP97863 570 aaKnown RBP11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Znf652Q5DU09 608 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Kiaa1211Q5PR69 1207 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Ccdc181Q80ZU5 509 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Psmd5Q8BJY1 504 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Rtp1Q8C8C1 263 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Podxl2Q8CAE9 603 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Parp10Q8CIE4 960 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Slc18a1Q8R090 521 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Arfgap2Q99K28 520 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 SarnpQ9D1J3 210 aaKnown RBP11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Fam111aQ9D2L9 613 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Gkap1Q9JMB0 366 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tlr2Q9QUN7 784 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Fem1bQ9Z2G0 627 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Cacna1fQ9JIS7 1985 aa11.9□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Odf2A3KGV1 830 aaKnown RBP11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Fam71aB7XG49 585 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Exoc4O35382 975 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Itgb5O70309 798 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Pde4aO89084 844 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Bace1P56818 501 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Gm5935Q497S0 212 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Krt15Q61414 452 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Ddx3xQ62167 662 aaKnown RBP11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 KaznQ69ZS8 779 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 Gga2Q6P5E6 603 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 TbataQ7TSD4 393 aa11.89□□□□□ -0.51
Ldb3-202ENSMUST00000022328 F13a1Q8BH61 732 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms