RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Pih1d3Q3KNI6 218 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 AdalQ80SY6 360 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 L3mbtl3Q8BLB7 883 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Cbwd1Q8VEH6 393 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Orc3Q9JK30 715 aaKnown RBP18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm9774A0A0A6YVU8 407 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 PrlP06879 226 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 PctpP53808 214 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Dab2ipQ3UHC7 1189 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Ppp2r5eQ61151 467 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Clca4aQ6Q473 924 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Stkld1Q80YS9 662 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Naa25Q8BWZ3 972 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Sh2d5Q8JZW5 429 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Scgb2b20Q9JI02 112 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Kcnc2Q14B80 642 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tspyl3Q3UYP3 334 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Atp6v1g2Q9WTT4 118 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Unc5cO08747 931 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 H2afzP0C0S6 128 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Znf667Q2TL60 609 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 H2afvQ3THW5 128 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Lmbrd1Q8K0B2 537 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Kif17Q99PW8 1038 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tex9Q9D845 387 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Llcfc1Q9D9P8 108 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Dclre1aQ9JIC3 1026 aa18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Cdc42ep4Q9JM96 349 aaKnown RBP18.24■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Birc5O70201 140 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Zc3h18Q0P678 948 aaKnown RBP18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Smcr8Q3UMB5 935 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Atf3Q60765 181 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Stxbp3Q60770 592 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gramd4Q8CB44 633 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Thumpd2Q9CZB3 528 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Wdr83Q9DAJ4 315 aaKnown RBP18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Clcn2Q9R0A1 908 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Mta2Q9R190 668 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 RalgdsQ03385 852 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Drp2Q05AA6 957 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Drc1Q3USS3 753 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 BoraQ8BS90 525 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Dclre1bQ8C7W7 541 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gja10Q9WUS4 505 aa18.23■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm3893E9Q1I1 302 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Zfp213E9QAW0 468 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Zfp212G3X8R7 492 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Wdhd1P59328 1117 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Polr2fP61219 127 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tmem63bQ3TWI9 832 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rasip1Q3U0S6 961 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Olfr832Q7TRG9 312 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Cys1Q8R4T1 145 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Hars2Q99KK9 505 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Uchl3Q9JKB1 230 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 AdnpQ9Z103 1108 aaKnown RBP18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Scgb2b21A0A087WQA9 112 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 AurkbO70126 345 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Magea6O89010 325 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Fam83bQ0VBM2 1012 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tmc8Q7TN58 722 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Cse1lQ9ERK4 971 aaKnown RBP18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rfwd2Q9R1A8 733 aaKnown RBP18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Stk10O55098 966 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Xrcc6P23475 608 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm5935Q497S0 212 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Oxr1Q4KMM3 866 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Hbs1lQ69ZS7 682 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Galnt17Q7TT15 598 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Wdr35Q8BND3 1181 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tmem120aQ8C1E7 343 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rfc4Q99J62 364 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rapgef4Q9EQZ6 1011 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Smok2bQ9QYZ3 484 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Smok2aQ9QYZ6 504 aa18.22■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm5936A2BG95 728 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm5640A3KG49 728 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 NumblO08919 604 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 GcP21614 476 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Celf1P28659 486 aaKnown RBP18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Nedd4P46935 887 aaKnown RBP18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Znf354cQ571J5 560 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Dph1Q5NCQ5 438 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Ahcyl1Q80SW1 530 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Bbs9Q811G0 885 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Krt82Q99M74 516 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 CpvlQ9D3S9 478 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Atp2c2A7L9Z8 944 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Zfp839E9PUU5 921 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Nr2f2P43135 414 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Ccdc84Q4VA36 332 aaKnown RBP18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rasa3Q60790 834 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Lars2Q8VDC0 902 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Snx24Q9CRB0 169 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 NynrinQ5DTZ0 1840 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 StrnO55106 780 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rbm41Q8JZV4 413 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Znf354bQ9QXT9 601 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Klrc2Q9WTJ9 238 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Coro1cQ9WUM4 474 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms