RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W NIP1P32497 812 aaKnown RBP1.12□□□□□ -2.23
YCK3YER123W YEF1P32622 495 aa1.12□□□□□ -2.23
YCK3YER123W TOS3P43637 560 aa1.12□□□□□ -2.23
YCK3YER123W PIB2P53191 635 aa1.12□□□□□ -2.23
YCK3YER123W STD1Q02794 444 aa1.12□□□□□ -2.23
YCK3YER123W KAP120Q02932 1032 aa1.12□□□□□ -2.23
YCK3YER123W MMT1Q03218 510 aa1.12□□□□□ -2.23
YCK3YER123W PRP42Q03776 544 aaKnown RBP1.12□□□□□ -2.23
YCK3YER123W RRI2Q12348 645 aa1.12□□□□□ -2.23
YCK3YER123W HTZ1Q12692 134 aaKnown RBP1.12□□□□□ -2.23
YCK3YER123W TY1B-AO13527 1196 aaKnown RBP1.11□□□□□ -2.23
YCK3YER123W ADE4P04046 510 aaKnown RBP1.11□□□□□ -2.23
YCK3YER123W RED1P14291 827 aa1.11□□□□□ -2.23
YCK3YER123W URA4P20051 364 aa1.11□□□□□ -2.23
YCK3YER123W TPS2P31688 896 aaKnown RBP1.11□□□□□ -2.23
YCK3YER123W CYM1P32898 989 aa1.11□□□□□ -2.23
YCK3YER123W ECT1P33412 323 aa1.11□□□□□ -2.23
YCK3YER123W STP2P38704 541 aa1.11□□□□□ -2.23
YCK3YER123W RPT4P53549 437 aaKnown RBP1.11□□□□□ -2.23
YCK3YER123W MRPL19P53875 158 aa1.11□□□□□ -2.23
YCK3YER123W RMT2Q03305 412 aa1.11□□□□□ -2.23
YCK3YER123W ARX1Q03862 593 aaKnown RBP1.11□□□□□ -2.23
YCK3YER123W SNT309Q06091 175 aaPredicted RBP1.11□□□□□ -2.23
YCK3YER123W YLR345WQ06137 509 aa1.11□□□□□ -2.23
YCK3YER123W YDL114WQ07530 308 aa1.11□□□□□ -2.23
YCK3YER123W SLF1Q12034 447 aaKnown RBP1.11□□□□□ -2.23
YCK3YER123W YCR024C-BQ3E7Z8 88 aa1.11□□□□□ -2.23
YCK3YER123W RIF1P29539 1916 aa1.1□□□□□ -2.23
YCK3YER123W STE7P06784 515 aa1.1□□□□□ -2.23
YCK3YER123W RPS19AP07280 144 aaKnown RBP1.1□□□□□ -2.23
YCK3YER123W RPS19BP07281 144 aaPredicted RBP1.1□□□□□ -2.23
YCK3YER123W MAS2P11914 482 aa1.1□□□□□ -2.23
YCK3YER123W PUT4P15380 627 aa1.1□□□□□ -2.23
YCK3YER123W ERG3P32353 365 aa1.1□□□□□ -2.23
YCK3YER123W COY1P34237 679 aa1.1□□□□□ -2.23
YCK3YER123W CHL4P38907 458 aa1.1□□□□□ -2.23
YCK3YER123W VAB2P40003 282 aa1.1□□□□□ -2.23
YCK3YER123W AIP1P46680 615 aaKnown RBP1.1□□□□□ -2.23
YCK3YER123W VHT1P53241 593 aa1.1□□□□□ -2.23
YCK3YER123W COS1P53822 381 aa1.1□□□□□ -2.23
YCK3YER123W OCA2P53949 197 aa1.1□□□□□ -2.23
YCK3YER123W YMR130WQ04223 302 aa1.1□□□□□ -2.23
YCK3YER123W DON1Q05610 365 aa1.1□□□□□ -2.23
YCK3YER123W DCS1Q06151 350 aa1.1□□□□□ -2.23
YCK3YER123W ATP1P07251 545 aaKnown RBP1.09□□□□□ -2.23
YCK3YER123W RPL4AP10664 362 aaKnown RBP1.09□□□□□ -2.23
YCK3YER123W REC107P21651 314 aa1.09□□□□□ -2.23
YCK3YER123W CMK2P22517 447 aa1.09□□□□□ -2.23
YCK3YER123W BRF1P29056 596 aa1.09□□□□□ -2.23
YCK3YER123W IME2P32581 645 aa1.09□□□□□ -2.23
YCK3YER123W RAD5P32849 1169 aaPredicted RBP1.09□□□□□ -2.23
YCK3YER123W TVP23P38962 199 aa1.09□□□□□ -2.23
YCK3YER123W MOB1P40484 314 aa1.09□□□□□ -2.23
YCK3YER123W YPS6P40583 537 aa1.09□□□□□ -2.23
YCK3YER123W RPL4BP49626 362 aaKnown RBP1.09□□□□□ -2.23
YCK3YER123W DIA1P54005 336 aa1.09□□□□□ -2.23
YCK3YER123W RPL21AQ02753 160 aaKnown RBP1.09□□□□□ -2.23
YCK3YER123W TAF11Q04226 346 aa1.09□□□□□ -2.23
YCK3YER123W FCY22Q12119 530 aa1.09□□□□□ -2.23
YCK3YER123W MED2Q12124 431 aa1.09□□□□□ -2.23
YCK3YER123W YOR097CQ12274 175 aaPredicted RBP1.09□□□□□ -2.23
YCK3YER123W RPL21BQ12672 160 aaKnown RBP1.09□□□□□ -2.23
YCK3YER123W TPI1P00942 248 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W PAB1P04147 577 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
YCK3YER123W RPS14AP06367 137 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W FUN26P31381 517 aa1.08□□□□□ -2.24
YCK3YER123W RCK2P38623 610 aa1.08□□□□□ -2.24
YCK3YER123W WSS1P38838 269 aa1.08□□□□□ -2.24
YCK3YER123W SPL2P38839 148 aa1.08□□□□□ -2.24
YCK3YER123W RPS14BP39516 138 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W YER079WP40052 210 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W RTR1P40084 226 aaPredicted RBP1.08□□□□□ -2.24
YCK3YER123W MMF1P40185 145 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W GAT2P40209 560 aa1.08□□□□□ -2.24
YCK3YER123W ACL4Q03771 387 aa1.08□□□□□ -2.24
YCK3YER123W YPR195CQ06594 109 aa1.08□□□□□ -2.24
YCK3YER123W YDL121CQ07541 149 aa1.08□□□□□ -2.24
YCK3YER123W YPL278CQ08990 100 aa1.08□□□□□ -2.24
YCK3YER123W YDR061WQ12298 539 aa1.08□□□□□ -2.24
YCK3YER123W PGA3Q12746 312 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W MLP1Q02455 1875 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W COX3P00420 269 aa1.08□□□□□ -2.24
YCK3YER123W DST1P07273 309 aa1.08□□□□□ -2.24
YCK3YER123W VMA2P16140 517 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W SOL2P37262 315 aa1.08□□□□□ -2.24
YCK3YER123W PEX22P39718 180 aa1.08□□□□□ -2.24
YCK3YER123W FRT2P39734 528 aa1.08□□□□□ -2.24
YCK3YER123W GPD2P41911 440 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W YGR067CP53243 804 aa1.08□□□□□ -2.24
YCK3YER123W ENT5Q03769 411 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W RPN9Q04062 393 aaKnown RBP1.08□□□□□ -2.24
YCK3YER123W UBX2Q04228 584 aa1.08□□□□□ -2.24
YCK3YER123W ROY1Q04847 553 aa1.08□□□□□ -2.24
YCK3YER123W NSE1Q07913 336 aa1.08□□□□□ -2.24
YCK3YER123W TIR4Q12218 487 aaPredicted RBP1.08□□□□□ -2.24
YCK3YER123W RUP1Q12242 671 aa1.08□□□□□ -2.24
YCK3YER123W YDL199CQ12407 687 aa1.08□□□□□ -2.24
YCK3YER123W PCL9Q12477 304 aa1.08□□□□□ -2.24
YCK3YER123W MTR10Q99189 972 aa1.08□□□□□ -2.24
YCK3YER123W ISN1Q99312 450 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 320.4 ms