RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W MRPS16Q02608 121 aa3.14□□□□□ -1.91
SIZ1YDR409W YPL062WQ02781 134 aa3.14□□□□□ -1.91
SIZ1YDR409W PNG1Q02890 363 aa3.14□□□□□ -1.91
SIZ1YDR409W MZM1Q03429 123 aaPredicted RBP3.14□□□□□ -1.91
SIZ1YDR409W YLR455WQ06188 304 aa3.14□□□□□ -1.91
SIZ1YDR409W ATP14Q12349 124 aa3.14□□□□□ -1.91
SIZ1YDR409W PNS1Q12412 539 aa3.14□□□□□ -1.91
SIZ1YDR409W APC2Q12440 853 aa3.14□□□□□ -1.91
SIZ1YDR409W MHF2Q3E829 80 aa3.14□□□□□ -1.91
SIZ1YDR409W LEU4P06208 619 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W CHS1P08004 1131 aa3.13□□□□□ -1.91
SIZ1YDR409W NAR1P23503 491 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W ARO7P32178 256 aa3.13□□□□□ -1.91
SIZ1YDR409W SHP1P34223 423 aa3.13□□□□□ -1.91
SIZ1YDR409W TCD2P36101 447 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W YBR056WP38081 501 aa3.13□□□□□ -1.91
SIZ1YDR409W IML3P38265 245 aa3.13□□□□□ -1.91
SIZ1YDR409W MBA1P38300 278 aa3.13□□□□□ -1.91
SIZ1YDR409W GRE3P38715 327 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
SIZ1YDR409W ACO2P39533 789 aa3.13□□□□□ -1.91
SIZ1YDR409W SSO2P39926 295 aa3.13□□□□□ -1.91
SIZ1YDR409W PRE6P40303 254 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W ATM1P40416 690 aa3.13□□□□□ -1.91
SIZ1YDR409W DLD2P46681 530 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W SSY5P47002 699 aa3.13□□□□□ -1.91
SIZ1YDR409W PET130P47065 347 aa3.13□□□□□ -1.91
SIZ1YDR409W TPN1P53099 579 aa3.13□□□□□ -1.91
SIZ1YDR409W MPS2P53159 387 aa3.13□□□□□ -1.91
SIZ1YDR409W PEX31P53203 462 aa3.13□□□□□ -1.91
SIZ1YDR409W YAT1P80235 687 aa3.13□□□□□ -1.91
SIZ1YDR409W MAK3Q03503 176 aa3.13□□□□□ -1.91
SIZ1YDR409W ENT5Q03769 411 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W YDR249CQ03787 373 aa3.13□□□□□ -1.91
SIZ1YDR409W GPM2Q12008 311 aa3.13□□□□□ -1.91
SIZ1YDR409W MLH3Q12083 715 aa3.13□□□□□ -1.91
SIZ1YDR409W NCE102Q12207 173 aaRIP-Chip data3.13□□□□□ -1.91not detected
SIZ1YDR409W YOL107WQ12239 342 aa3.13□□□□□ -1.91
SIZ1YDR409W CTF3Q12748 733 aa3.13□□□□□ -1.91
SIZ1YDR409W YCL012CQ8J0M4 134 aa3.13□□□□□ -1.91
SIZ1YDR409W CDC36P06100 191 aaPredicted RBP3.13□□□□□ -1.91
SIZ1YDR409W MAS1P10507 462 aa3.13□□□□□ -1.91
SIZ1YDR409W SGV1P23293 657 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W AAT2P23542 418 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W CAM1P29547 415 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W SSO1P32867 290 aa3.13□□□□□ -1.91
SIZ1YDR409W TOD6P34219 525 aa3.13□□□□□ -1.91
SIZ1YDR409W SDH8P38345 138 aa3.13□□□□□ -1.91
SIZ1YDR409W RRP4P38792 359 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W PLB1P39105 664 aa3.13□□□□□ -1.91
SIZ1YDR409W HAT2P39984 401 aa3.13□□□□□ -1.91
SIZ1YDR409W YJL218WP40892 196 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W OTU1P43558 301 aa3.13□□□□□ -1.91
SIZ1YDR409W MKC7P53379 596 aa3.13□□□□□ -1.91
SIZ1YDR409W YPL068CQ02749 293 aa3.13□□□□□ -1.91
SIZ1YDR409W KAP120Q02932 1032 aa3.13□□□□□ -1.91
SIZ1YDR409W TAF12Q03761 539 aa3.13□□□□□ -1.91
SIZ1YDR409W DXO1Q06349 442 aa3.13□□□□□ -1.91
SIZ1YDR409W PEX27Q08580 376 aa3.13□□□□□ -1.91
SIZ1YDR409W SLF1Q12034 447 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W YLR049CQ12110 428 aa3.13□□□□□ -1.91
SIZ1YDR409W HRP1Q99383 534 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W CBP1P07252 654 aa3.13□□□□□ -1.91
SIZ1YDR409W ALG7P07286 448 aa3.13□□□□□ -1.91
SIZ1YDR409W GCD1P09032 578 aaPredicted RBP3.13□□□□□ -1.91
SIZ1YDR409W DSF1P0CX08 502 aa3.13□□□□□ -1.91
SIZ1YDR409W YNR073CP0CX09 502 aa3.13□□□□□ -1.91
SIZ1YDR409W FPS1P23900 669 aa3.13□□□□□ -1.91
SIZ1YDR409W CNB1P25296 175 aa3.13□□□□□ -1.91
SIZ1YDR409W ITR1P30605 584 aa3.13□□□□□ -1.91
SIZ1YDR409W PTM1P32857 523 aa3.13□□□□□ -1.91
SIZ1YDR409W CMC1P36064 111 aa3.13□□□□□ -1.91
SIZ1YDR409W ANR2P36090 516 aaPredicted RBP3.13□□□□□ -1.91
SIZ1YDR409W APE3P37302 537 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W ATP3P38077 311 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W COS111P38308 924 aa3.13□□□□□ -1.91
SIZ1YDR409W TAE1P38340 232 aa3.13□□□□□ -1.91
SIZ1YDR409W STP2P38704 541 aa3.13□□□□□ -1.91
SIZ1YDR409W YHR177WP38867 453 aa3.13□□□□□ -1.91
SIZ1YDR409W ISC1P40015 477 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W SOK1P40317 901 aa3.13□□□□□ -1.91
SIZ1YDR409W AYR1P40471 297 aa3.13□□□□□ -1.91
SIZ1YDR409W PHB1P40961 287 aa3.13□□□□□ -1.91
SIZ1YDR409W NIT3P49954 291 aa3.13□□□□□ -1.91
SIZ1YDR409W PRM1P53835 661 aa3.13□□□□□ -1.91
SIZ1YDR409W IBD2P53892 351 aa3.13□□□□□ -1.91
SIZ1YDR409W ARG5,6Q01217 863 aa3.13□□□□□ -1.91
SIZ1YDR409W SPP2Q02521 185 aa3.13□□□□□ -1.91
SIZ1YDR409W TY1A-DR2Q03964 440 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W YDR124WQ04608 324 aa3.13□□□□□ -1.91
SIZ1YDR409W VTA1Q06263 330 aa3.13□□□□□ -1.91
SIZ1YDR409W MFG1Q07684 458 aa3.13□□□□□ -1.91
SIZ1YDR409W FEX1Q08913 375 aa3.13□□□□□ -1.91
SIZ1YDR409W SNU23Q12368 194 aaPredicted RBP3.13□□□□□ -1.91
SIZ1YDR409W AIM45Q12480 344 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W EFG1Q3E705 233 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W PNO1Q99216 274 aaKnown RBP3.13□□□□□ -1.91
SIZ1YDR409W MRP2P10663 115 aaPredicted RBP3.12□□□□□ -1.91
SIZ1YDR409W GAL3P13045 520 aa3.12□□□□□ -1.91
SIZ1YDR409W RPL3P14126 387 aaKnown RBP3.12□□□□□ -1.91
SIZ1YDR409W PEX34P25584 144 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms