RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	PEX11	Q12462	236 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.58	□□□□□ -1.84
SWH1	YAR042W	TY1A-OL	Q92392	440 aa	Known RBP	3.58	□□□□□ -1.84
SWH1	YAR042W	CDC21	P06785	304 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	TFS1	P14306	219 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	MTF1	P14908	341 aa	Known RBP	3.58	□□□□□ -1.84
SWH1	YAR042W	YCR087C-A	P37263	153 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	COS8	P38723	381 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	BTT1	P40314	149 aa	Predicted RBP	3.58	□□□□□ -1.84
SWH1	YAR042W	IRC7	P43623	340 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	TAD2	P47058	250 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	MOG1	P47123	218 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	CSN12	P47130	423 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	PRP24	P49960	444 aa	Known RBP	3.58	□□□□□ -1.84
SWH1	YAR042W	ARL3	Q02804	198 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	PNG1	Q02890	363 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	PIR1	Q03178	341 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	VBA1	Q04301	562 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	YLR173W	Q06247	608 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	ZEO1	Q08245	113 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	DIN7	Q12086	430 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	EAF3	Q12432	401 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	YLR099W-A	Q3E798	87 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	YOR338W	Q99326	363 aa		3.58	□□□□□ -1.84
SWH1	YAR042W	SLH1	P53327	1967 aa	Known RBP	3.58	□□□□□ -1.84
SWH1	YAR042W	RAS1	P01119	309 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	CBP6	P07253	162 aa	Predicted RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	SCH9	P11792	824 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	REV1	P12689	985 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	MET8	P15807	274 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	SIS1	P25294	352 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
SWH1	YAR042W	MRP20	P32387	263 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	LHP1	P33399	275 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	SPO23	P33757	523 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	SOL2	P37262	315 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	YHR122W	P38829	231 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	TIF11	P38912	153 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	TIM17	P39515	158 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	SWM2	P40342	146 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	HIS6	P40545	261 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	NSE4	P43124	402 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	VOA1	P53262	265 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	ATF2	P53296	535 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	TPS1	Q00764	495 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	AAT1	Q01802	451 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	KAP120	Q02932	1032 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	YPL113C	Q02961	396 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	YLR046C	Q12253	270 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	TY1A-NL1	Q12391	440 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	SFG1	Q12507	346 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	MER1	P16523	270 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	AAC3	P18238	307 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	MIH1	P23748	554 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	COQ2	P32378	372 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	SIP1	P32578	815 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	PXA2	P34230	853 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
SWH1	YAR042W	RPF2	P36160	344 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	SHE1	P38200	338 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	UTP25	P40498	721 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	QRI1	P43123	477 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	IDS2	P46958	469 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	ROG1	P53118	685 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	RVB1	Q03940	463 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	GSF2	Q04697	403 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	YLR446W	Q06204	433 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	YPL245W	Q12179	454 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	SRN2	Q99176	213 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	ERD2	P18414	219 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	APA2	P22108	325 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	GEX1	P25596	615 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	ECM25	P32525	599 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	GEX2	P36173	615 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	ALG3	P38179	458 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	HTD2	P38790	280 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	TAT2	P38967	592 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	IME4	P41833	600 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	YGR201C	P42936	225 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	BIT61	P47041	543 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	YNL140C	P53910	189 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	ASI3	P53983	676 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	ACS1	Q01574	713 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	RRP45	Q05636	305 aa	Known RBP	3.57	□□□□□ -1.84
SWH1	YAR042W	YOL114C	Q12322	202 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	MRX4	Q12467	430 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	MHT1	Q12525	324 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	YIL002W-A	Q3E7Z5	69 aa		3.57	□□□□□ -1.84
SWH1	YAR042W	SLM5	P25345	492 aa	Known RBP	3.56	□□□□□ -1.84
SWH1	YAR042W	SED4	P25365	1065 aa		3.56	□□□□□ -1.84
SWH1	YAR042W	IDH2	P28241	369 aa	Known RBP	3.56	□□□□□ -1.84
SWH1	YAR042W	ARC19	P33204	171 aa	Known RBP	3.56	□□□□□ -1.84
SWH1	YAR042W	TIP20	P33891	701 aa		3.56	□□□□□ -1.84
SWH1	YAR042W	FLO10	P36170	1169 aa		3.56	□□□□□ -1.84
SWH1	YAR042W	LDH1	P38139	375 aa		3.56	□□□□□ -1.84
SWH1	YAR042W	YBR238C	P38330	731 aa	Known RBP	3.56	□□□□□ -1.84
SWH1	YAR042W	HEM14	P40012	539 aa		3.56	□□□□□ -1.84
SWH1	YAR042W	PFS2	P42841	465 aa	Known RBP	3.56	□□□□□ -1.84
SWH1	YAR042W	SIP4	P46954	829 aa		3.56	□□□□□ -1.84
SWH1	YAR042W	PMT5	P52867	743 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 172.7 ms