RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 IL9P15248 144 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 MSNP26038 577 aaKnown RBP19.12■□□□□ 0.65
PHGDH-234ENST00000642041 RPA1P27694 616 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 PRR16Q569H4 304 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 HERC6Q8IVU3 1022 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 AOPEPQ8N6M6 819 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 ETNPPLQ8TBG4 499 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 LARP4BQ92615 738 aaKnown RBP19.12■□□□□ 0.65
PHGDH-234ENST00000642041 HAS1Q92839 578 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 DHTKD1Q96HY7 919 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-234ENST00000642041 POLR3CQ9BUI4 534 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-234ENST00000642041 ACAD9Q9H845 621 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 TUFT1Q9NNX1 390 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 BIN1O00499 593 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 PSMA7O14818 248 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 OPLAHO14841 1288 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 FGFR1OPO95684 399 aaKnown RBP19.11■□□□□ 0.65
PHGDH-234ENST00000642041 PLCG1P19174 1290 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 GSDMDP57764 484 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 SPATA1Q5VX52 437 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 PCNX4Q63HM2 1172 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 RNF207Q6ZRF8 634 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 ARMCX2Q7L311 632 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 DEFB128Q7Z7B8 93 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 FCHSD1Q86WN1 690 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 PLA2G4DQ86XP0 818 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 TRERF1Q96PN7 1200 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 PHOX2BQ99453 314 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 KATNBL1Q9H079 304 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 TBC1D22BQ9NU19 505 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 KCND2Q9NZV8 630 aa19.11■□□□□ 0.65
PHGDH-234ENST00000642041 ASTN1O14525 1302 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 FRMPD4Q14CM0 1322 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 A0A087X0B3 334 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 LOC102724159A0A0B4J2E5 919 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 MEIS1O00470 390 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 ZEB2O60315 1214 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 DKC1O60832 514 aaKnown RBP eCLIP19.1■□□□□ 0.651e-16■■■■■ 39.7
PHGDH-234ENST00000642041 KCNA5P22460 613 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 CCT6AP40227 531 aaKnown RBP19.1■□□□□ 0.65
PHGDH-234ENST00000642041 ZNF75DP51815 510 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 PWP2Q15269 919 aaKnown RBP19.1■□□□□ 0.65
PHGDH-234ENST00000642041 FSCN1Q16658 493 aaKnown RBP19.1■□□□□ 0.65
PHGDH-234ENST00000642041 FILIP1LQ4L180 1135 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 TMEM119Q4V9L6 283 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 PTCRAQ6ISU1 281 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-234ENST00000642041 ZSCAN30Q86W11 494 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 RAD54LQ92698 747 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 FGD4Q96M96 766 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 MFSD14AQ96MC6 490 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 MXRA8Q9BRK3 442 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 HOMER2Q9NSB8 354 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 RWDD2AQ9UIY3 292 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 DNM3Q9UQ16 869 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 RIPK3Q9Y572 518 aa19.1■□□□□ 0.65
PHGDH-234ENST00000642041 COL4A4P53420 1690 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-234ENST00000642041 GRXCR2A6NFK2 248 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 EDIL3O43854 480 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 CDK11BP21127 795 aaKnown RBP19.09■□□□□ 0.65
PHGDH-234ENST00000642041 TNFAIP2Q03169 654 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 PPP2R5CQ13362 524 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 TPD52L1Q16890 204 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-234ENST00000642041 PUS10Q3MIT2 529 aaKnown RBP19.09■□□□□ 0.65
PHGDH-234ENST00000642041 NAALADL2Q58DX5 795 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 HFE2Q6ZVN8 426 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 UNC13DQ70J99 1090 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.09■□□□□ 0.65
PHGDH-234ENST00000642041 SPRED2Q7Z698 418 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 NLRX1Q86UT6 975 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 DRC7Q8IY82 874 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 RDM1Q8NG50 284 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 CLEC4DQ8WXI8 215 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 IWS1Q96ST2 819 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 TRIM9Q9C026 710 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 EXOC1Q9NV70 894 aa19.09■□□□□ 0.65
PHGDH-234ENST00000642041 GNEQ9Y223 722 aaKnown RBP19.09■□□□□ 0.65
PHGDH-234ENST00000642041 SCN5AQ14524 2016 aa19.08■□□□□ 0.65
PHGDH-234ENST00000642041 NFIBO00712 420 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 SUPT20HL2P0C7V6 817 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 RFC2P35250 354 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 FAM114A1Q8IWE2 563 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 DNERQ8NFT8 737 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 NSUN6Q8TEA1 469 aaKnown RBP19.08■□□□□ 0.64
PHGDH-234ENST00000642041 GDPD5Q8WTR4 605 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 SLC5A5Q92911 643 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 MMTAG2Q9BU76 263 aaKnown RBP19.08■□□□□ 0.64
PHGDH-234ENST00000642041 TEKT3Q9BXF9 490 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 SPTBN4Q9H254 2564 aa19.08■□□□□ 0.64
PHGDH-234ENST00000642041 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-234ENST00000642041 TPM2P07951 284 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 HOXA13P31271 388 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-234ENST00000642041 PAK1Q13153 545 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 EPHA7Q15375 998 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 MUM1L1Q5H9M0 696 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 NSMFQ6X4W1 530 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 CCDC65Q8IXS2 484 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 GIMAP8Q8ND71 665 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-234ENST00000642041 AP5M1Q9H0R1 490 aa19.07■□□□□ 0.64
PHGDH-234ENST00000642041 JADE2Q9NQC1 790 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms