RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-259	ENST00000639406	ANKRD27	Q96NW4	1050 aa		11.64	□□□□□ -0.55
KCNMA1-259	ENST00000639406	CAAP1	Q9H8G2	361 aa		11.64	□□□□□ -0.55
KCNMA1-259	ENST00000639406	UBN1	Q9NPG3	1134 aa		11.64	□□□□□ -0.55
KCNMA1-259	ENST00000639406	BLOC1S6	Q9UL45	172 aa		11.64	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PNMA6E	A0A0J9YXQ4	647 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	DDX39A	O00148	427 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	OCM2	P0CE71	109 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	OCM	P0CE72	109 aa	Predicted RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	SRGAP2B	P0DMP2	458 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TMOD1	P28289	359 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ARL4C	P56559	192 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	INPP5A	Q14642	412 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	RCN1	Q15293	331 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	BLID	Q8IZY5	108 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	CMTR1	Q8N1G2	835 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	MTBP	Q96DY7	904 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	THTPA	Q9BU02	230 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	NPHS2	Q9NP85	383 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PDIA3	P30101	505 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	KRT76	Q01546	638 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PTGDR	Q13258	359 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	RIOK1	Q9BRS2	568 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	FHOD1	Q9Y613	1164 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	CARMIL3	Q8ND23	1372 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	AKAP10	O43572	662 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TBC1D4	O60343	1298 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	OR52Z1	P0C646	297 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ARHGAP27	Q6ZUM4	889 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	DHX40	Q8IX18	779 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TERB1	Q8NA31	727 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	EDEM3	Q9BZQ6	932 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	SYNGAP1	Q96PV0	1343 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ATP9A	O75110	1047 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	KRT38	O76015	456 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	P4HA1	P13674	534 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	YY1	P25490	414 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PTK2	Q05397	1052 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	GRIN1	Q05586	938 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	HABP4	Q5JVS0	413 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	WAPL	Q7Z5K2	1190 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	NCAPG2	Q86XI2	1143 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	C17orf50	Q8WW18	174 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	DDX17	Q92841	729 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ZBTB18	Q99592	522 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	LZTS2	Q9BRK4	669 aa		11.63	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PI4K2B	G5E9Z4	385 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	KPNA4	O00629	521 aa	Predicted RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	AHCYL1	O43865	530 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TAC1	P20366	129 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	KCNB1	Q14721	858 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	KLHL31	Q9H511	634 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PRDM1	O75626	825 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	S100A9	P06702	114 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	CCDC149	Q6ZUS6	474 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	G2E3	Q7L622	706 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TPH2	Q8IWU9	490 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	C3orf20	Q8ND61	904 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	SETDB2	Q96T68	719 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	MMS19	Q96T76	1030 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	GINS4	Q9BRT9	223 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	MTA3	Q9BTC8	594 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	GTSE1	Q9NYZ3	720 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	SEMA3E	O15041	775 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	GOLGA8H	P0CJ92	632 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	C16orf72	Q14CZ0	275 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	DDX47	Q9H0S4	455 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	POLD4	Q9HCU8	107 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ATAD3A	Q9NVI7	634 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	NUP160	Q12769	1436 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TIMM10	P62072	90 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	RPS6	P62753	249 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	RUNX1T1	Q06455	604 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TAF12	Q16514	161 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TTC33	Q6PID6	262 aa	Predicted RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	DNAAF3	Q8N9W5	541 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PIGO	Q8TEQ8	1089 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	COL4A3BP	Q9Y5P4	624 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	TAF4	O00268	1085 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	XPOT	O43592	962 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	HMOX2	P30519	316 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ADD1	P35611	737 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	CAPRIN1	Q14444	709 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ELMSAN1	Q6PJG2	1045 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	POTEA	Q6S8J7	498 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	REXO1	Q8N1G1	1221 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	SPATA4	Q8NEY3	305 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	LRRC39	Q96DD0	335 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	KCNK16	Q96T55	309 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	PNMA2	Q9UL42	364 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	NDUFB9	Q9Y6M9	179 aa		11.62	□□□□□ -0.55
KCNMA1-259	ENST00000639406	FAM187A	A6NFU0	413 aa		11.61	□□□□□ -0.55
KCNMA1-259	ENST00000639406	ZBTB24	O43167	697 aa	Predicted RBP	11.61	□□□□□ -0.55
KCNMA1-259	ENST00000639406	CLK1	P49759	484 aa	Known RBP	11.61	□□□□□ -0.55
KCNMA1-259	ENST00000639406	NUP107	P57740	925 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms