RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ST18O60284 1047 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 CCNT1O60563 726 aaKnown RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 GNRH1P01148 92 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 XRCC5P13010 732 aaKnown RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 MCM7P33993 719 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 NASPP49321 788 aaPredicted RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 MRPL12P52815 198 aaKnown RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 ACLYP53396 1101 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 MRPS9P82933 396 aaKnown RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 MTMR1Q13613 665 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 TTLL4Q14679 1199 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 EARS2Q5JPH6 523 aaKnown RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 BTNL9Q6UXG8 535 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 ARRDC4Q8NCT1 418 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 SCLT1Q96NL6 688 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 LBHD1Q9BQE6 289 aaPredicted RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 FTOQ9C0B1 505 aaKnown RBP eCLIP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 IRF2BPLQ9H1B7 796 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 PAK6Q9NQU5 681 aaPredicted RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 PPT2Q9UMR5 302 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 EFR3BQ9Y2G0 817 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 ESYT3A0FGR9 886 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 NCOR1O75376 2440 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 UPP2O95045 317 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 UBA1P22314 1058 aaKnown RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 CCND2P30279 289 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 CDC25AP30304 524 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 PRMT2P55345 433 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 ZNF174Q15697 407 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 LAMA4Q16363 1823 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 WDFY4Q6ZS81 3184 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 SGMS1Q86VZ5 419 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 PLA2G4DQ86XP0 818 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 MICALL1Q8N3F8 863 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 LILRB2Q8N423 598 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 METTL13Q8N6R0 699 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 TBCKQ8TEA7 893 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 SCFD2Q8WU76 684 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 BADQ92934 168 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 C6orf50Q9HD87 102 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 NPHS2Q9NP85 383 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 RBM28Q9NW13 759 aaKnown RBP5.59□□□□□ -1.51
SYCP1-209ENST00000613524 SNTG2Q9NY99 539 aa5.59□□□□□ -1.51
SYCP1-209ENST00000613524 RLFQ13129 1914 aa5.59□□□□□ -1.52
SYCP1-209ENST00000613524 LOC285556D6RIA3 1793 aa5.59□□□□□ -1.52
SYCP1-209ENST00000613524 DNAJC25-GNG10A0A024R161 153 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 CTDNEP1O95476 244 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 ITGB5P18084 799 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 USP4Q13107 963 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 PKP1Q13835 747 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 RABEP1Q15276 862 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 PKN1Q16512 942 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 KIAA0753Q2KHM9 967 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 NBPF20Q3BBV1 942 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 KMT5BQ4FZB7 885 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 INTS6LQ5JSJ4 861 aaKnown RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 TAPT1Q6NXT6 567 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 TMX3Q96JJ7 454 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 C8orf76Q96K31 380 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 MPHOSPH6Q99547 160 aaKnown RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 SUGCTQ9HAC7 445 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 LMBRD1Q9NUN5 540 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 SETD4Q9NVD3 440 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 UBP1Q9NZI7 540 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 LIMCH1Q9UPQ0 1083 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 DOCK5Q9H7D0 1870 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 MYH7BA7E2Y1 1941 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 GRXCR1A8MXD5 290 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 RGS20O76081 388 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 DXOO77932 396 aaKnown RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 OAZ1P54368 228 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 ZNF445P59923 1031 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 CCDC173Q0VFZ6 552 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 PFKFB3Q16875 520 aaPredicted RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 PLEKHG6Q3KR16 790 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 WDR75Q8IWA0 830 aaKnown RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 RNF169Q8NCN4 708 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 HTATIP2Q9BUP3 242 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 SPZ1Q9BXG8 430 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 UBE2OQ9C0C9 1292 aaKnown RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 BARHL2Q9NY43 387 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 SMC3Q9UQE7 1217 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 ZDHHC9Q9Y397 364 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 FAM86B1E9PN63 330 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 SSBP05455 408 aaKnown RBP eCLIP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 HOXC6P09630 235 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 FAM86B2P0C5J1 330 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 ITGB8P26012 769 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 GJB2P29033 226 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 TXKP42681 527 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 MAGEA10P43363 369 aaPredicted RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 ITGA7Q13683 1181 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 TMEM266Q2M3C6 531 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 GNPTABQ3T906 1256 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 BRDTQ58F21 947 aaPredicted RBP5.58□□□□□ -1.52
SYCP1-209ENST00000613524 SPECC1Q5M775 1068 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 EP400NLQ6ZTU2 488 aa5.58□□□□□ -1.52
SYCP1-209ENST00000613524 ANKS3Q6ZW76 656 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms