RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PFKPQ01813 784 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 RTP5Q14D33 572 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 PCBP1Q15365 356 aaKnown RBP eCLIP5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 TAF7LQ5H9L4 462 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 PRR31Q5SQ13 230 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 PKN3Q6P5Z2 889 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 KIF18BQ86Y91 864 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 DTX3Q8N9I9 347 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 CLIC6Q96NY7 704 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 BOCQ9BWV1 1114 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 SLKQ9H2G2 1235 aaPredicted RBP5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 DLL4Q9NR61 685 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 KCNH7Q9NS40 1196 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 B4GALT6Q9UBX8 382 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 B3GALT1Q9Y5Z6 326 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 TNRQ92752 1358 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 ERVK-7P63135 1459 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 UNC13BO14795 1591 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 NEURL4Q96JN8 1562 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 UGGT1Q9NYU2 1555 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 A0A087X0B3 334 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 PRAMEF25A6NGN4 478 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 ZNF839A8K0R7 811 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 HIP1RO75146 1068 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 MYCLP1P12525 358 aaPredicted RBP5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 SARSP49591 514 aaKnown RBP5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 HERVK_113P62684 666 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 IRF9Q00978 393 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 FZD5Q13467 585 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 SKIDA1Q1XH10 827 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 EGFLAMQ63HQ2 1017 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 AHI1Q8N157 1196 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 PPM1KQ8N3J5 372 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 IGDCC4Q8TDY8 1250 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 ZSWIM3Q96MP5 696 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 SLC39A2Q9NP94 309 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 NTMQ9P121 344 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 ROCK1Q13464 1354 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 MED14O60244 1454 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 TET3O43151 1660 aa5.11□□□□□ -1.59
CKS1BP3-201ENST00000600888 GSG1L2A8MUP6 293 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 CYP7B1O75881 506 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 KRT37O76014 449 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 SDHAP31040 664 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 IL13P35225 146 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 IQGAP1P46940 1657 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 SLURP1P55000 103 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 MLLT6P55198 1093 aaPredicted RBP5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 KANK1Q14678 1352 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 TMEM132BQ14DG7 1078 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 PHF19Q5T6S3 580 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 EFCAB6Q5THR3 1501 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 RPRD2Q5VT52 1461 aaKnown RBP5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 CARFQ8N187 725 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 THEMISQ8N1K5 641 aaPredicted RBP5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 MARCH10Q8NA82 808 aaPredicted RBP5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 WRNIP1Q96S55 665 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 RRP7BPQ9NSQ0 103 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 IFT57Q9NWB7 429 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 BTBD7Q9P203 1132 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 ARHGAP20Q9P2F6 1191 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 ARHGAP28Q9P2N2 729 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 CROTQ9UKG9 612 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 ANKRD50Q9ULJ7 1429 aa5.1□□□□□ -1.59
CKS1BP3-201ENST00000600888 MYO5BQ9ULV0 1848 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 PIK3C2BO00750 1634 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 IQGAP3Q86VI3 1631 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 SLIT1O75093 1534 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 RRBP1Q9P2E9 1410 aaKnown RBP5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 RASSF10A6NK89 507 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 H7C1D1 291 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 DDX3XO00571 662 aaKnown RBP eCLIP5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 DVL2O14641 736 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 FOXP2O15409 715 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 PDE8AO60658 829 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 TRIM13O60858 407 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 F2P00734 622 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 MMEP08473 750 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 BMP7P18075 431 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 AOAHP28039 575 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 GLRBP48167 497 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 CC2D1AQ6P1N0 951 aaPredicted RBP5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 NXPE1Q8N323 547 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 ASB15Q8WXK1 588 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 ZKSCAN5Q9Y2L8 839 aa5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 ARID1BQ8NFD5 2236 aaPredicted RBP5.09□□□□□ -1.59
CKS1BP3-201ENST00000600888 E9PCH4 1651 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 SYNMO15061 1565 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 ARHGAP23Q9P227 1491 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 NOS1P29475 1434 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZNF891A8MT65 544 aaPredicted RBP5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 FBXO21O94952 628 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 IL18BPO95998 194 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 ATP2A2P16615 1042 aaKnown RBP5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZNF28P17035 718 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 PTGS1P23219 599 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 KCNC1P48547 511 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 MASP1P48740 699 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 KIF11P52732 1056 aa5.08□□□□□ -1.6
CKS1BP3-201ENST00000600888 DSG1Q02413 1049 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms