RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 FAM122AQ96E09 287 aa15.39■□□□□ 0.05
TRIM28-211ENST00000597968 CDCA3Q99618 268 aaPredicted RBP15.39■□□□□ 0.05
TRIM28-211ENST00000597968 ADAM2Q99965 735 aa15.39■□□□□ 0.05
TRIM28-211ENST00000597968 TM6SF1Q9BZW5 370 aa15.39■□□□□ 0.05
TRIM28-211ENST00000597968 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
TRIM28-211ENST00000597968 DISC1Q9NRI5 854 aa15.39■□□□□ 0.05
TRIM28-211ENST00000597968 LZTS1Q9Y250 596 aa15.39■□□□□ 0.05
TRIM28-211ENST00000597968 SAMM50Q9Y512 469 aa15.39■□□□□ 0.05
TRIM28-211ENST00000597968 CYP3A7-CYP3A51PA0A087WV96 503 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 MBTPS2O43462 519 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 DCXO43602 365 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 DEXIO95424 95 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 CPA1P15085 419 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 EIF4BP23588 611 aaKnown RBP15.38■□□□□ 0.05
TRIM28-211ENST00000597968 CYP3A7P24462 503 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 Q4G0T1 1027 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 METTL13Q8N6R0 699 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 LINC01465Q8N7H1 131 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 EFHBQ8N7U6 833 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 POF1BQ8WVV4 589 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 TMEM40Q8WWA1 233 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 SLC5A5Q92911 643 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 KCNH6Q9H252 994 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 ATP6V0A4Q9HBG4 840 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 ALG13Q9NP73 1137 aaKnown RBP15.38■□□□□ 0.05
TRIM28-211ENST00000597968 C11orf16Q9NQ32 467 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 GABBR1Q9UBS5 961 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 PCDHA4Q9UN74 947 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 GINS2Q9Y248 185 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 CYP46A1Q9Y6A2 500 aa15.38■□□□□ 0.05
TRIM28-211ENST00000597968 GAS7O60861 476 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 OATP04181 439 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 ZSCAN20P17040 1043 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-211ENST00000597968 LAG3P18627 525 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 NLRP5P59047 1200 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
TRIM28-211ENST00000597968 COASYQ13057 564 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 DSC3Q14574 896 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 KIZQ2M2Z5 673 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 TMEM266Q2M3C6 531 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 EP400NLQ6ZTU2 488 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 FAM228AQ86W67 206 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 DAGLBQ8NCG7 672 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 KHSRPQ92945 711 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM28-211ENST00000597968 MSLNLQ96KJ4 702 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 OSMRQ99650 979 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 TEKT3Q9BXF9 490 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 TMEM117Q9H0C3 514 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 CD207Q9UJ71 328 aa15.37■□□□□ 0.05
TRIM28-211ENST00000597968 CPLX1O14810 134 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 MSH4O15457 936 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 MGEA5O60502 916 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 EOMESO95936 686 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 PPM1AP35813 382 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 PLCB3Q01970 1234 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 LRCH2Q5VUJ6 765 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 EFCAB12Q6NXP0 572 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 NIFKQ9BYG3 293 aaKnown RBP15.36■□□□□ 0.05
TRIM28-211ENST00000597968 CDHR5Q9HBB8 845 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 TLR9Q9NR96 1032 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 VPS54Q9P1Q0 977 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 PUF60Q9UHX1 559 aaKnown RBP15.36■□□□□ 0.05
TRIM28-211ENST00000597968 AKT3Q9Y243 479 aa15.36■□□□□ 0.05
TRIM28-211ENST00000597968 TBKBP1A7MCY6 615 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 TBX10O75333 385 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 PSMD10O75832 226 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 VTNP04004 478 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 SRGAP2BP0DMP2 458 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 NDUFV1P49821 464 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 NLRP11P59045 1033 aaKnown RBP15.35■□□□□ 0.05
TRIM28-211ENST00000597968 TBC1D8BQ0IIM8 1120 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 PAN2Q504Q3 1202 aaKnown RBP15.35■□□□□ 0.05
TRIM28-211ENST00000597968 XKR3Q5GH77 459 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 B3GNT9Q6UX72 402 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 EXOC8Q8IYI6 725 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 SMRP1Q8NCR6 262 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 RASGRP4Q8TDF6 673 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 TBCKQ8TEA7 893 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 MBOAT7Q96N66 472 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 JPH2Q9BR39 696 aaPredicted RBP15.35■□□□□ 0.05
TRIM28-211ENST00000597968 TRAIPQ9BWF2 469 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 INO80BQ9C086 356 aaPredicted RBP15.35■□□□□ 0.05
TRIM28-211ENST00000597968 ADAMTS10Q9H324 1103 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 NGRNQ9NPE2 291 aaKnown RBP15.35■□□□□ 0.05
TRIM28-211ENST00000597968 CHST12Q9NRB3 414 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 DACT1Q9NYF0 836 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 PPME1Q9Y570 386 aa15.35■□□□□ 0.05
TRIM28-211ENST00000597968 A0A0U1RQF3 1178 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 M0R2N6 131 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 EDIL3O43854 480 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 ZNF862O60290 1169 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM28-211ENST00000597968 CDKL5O76039 1030 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 FGF18O76093 207 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 DNAJB1P25685 340 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 DNM2P50570 870 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 GPC3P51654 580 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 PRKCEQ02156 737 aa15.34■□□□□ 0.05
TRIM28-211ENST00000597968 DLX2Q07687 328 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms