RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 NPEPPSP55786 919 aa28.76■■■□□ 2.19
TRIM28-204ENST00000594806 PLEKHG4Q58EX7 1191 aa28.76■■■□□ 2.19
TRIM28-204ENST00000594806 SEPT8Q92599 483 aa28.76■■■□□ 2.19
TRIM28-204ENST00000594806 DBR1Q9UK59 544 aaKnown RBP28.76■■■□□ 2.19
TRIM28-204ENST00000594806 ARID2Q68CP9 1835 aa28.76■■■□□ 2.19
TRIM28-204ENST00000594806 ABHD14A-ACY1A0A1B0GW23 586 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 CLCN3P51790 818 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 POLGP54098 1239 aaPredicted RBP28.75■■■□□ 2.19
TRIM28-204ENST00000594806 PTPAQ15257 358 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 FBXO47Q5MNV8 452 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 ATL3Q6DD88 541 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 OTOP2Q7RTS6 562 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 SNX29Q8TEQ0 813 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 AKT3Q9Y243 479 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 CLIC4Q9Y696 253 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 LOXHD1Q8IVV2 1947 aa28.75■■■□□ 2.19
TRIM28-204ENST00000594806 SIP14410 1827 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 DGAT1O75907 488 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 LONP1P36776 959 aaKnown RBP28.74■■■□□ 2.19
TRIM28-204ENST00000594806 RARRES1P49788 294 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 IKBKEQ14164 716 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 ODR4Q5SWX8 454 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 FAM173BQ6P4H8 233 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 LRRC71Q8N4P6 559 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 TCP11Q8WWU5 503 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 SH2D3AQ9BRG2 576 aa28.74■■■□□ 2.19
TRIM28-204ENST00000594806 ZBTB39O15060 712 aa28.73■■■□□ 2.19
TRIM28-204ENST00000594806 CRYBB1P53674 252 aaPredicted RBP28.73■■■□□ 2.19
TRIM28-204ENST00000594806 TMEM62Q0P6H9 643 aa28.73■■■□□ 2.19
TRIM28-204ENST00000594806 TSHZ1Q6ZSZ6 1077 aa28.73■■■□□ 2.19
TRIM28-204ENST00000594806 DBF4BQ8NFT6 615 aa28.73■■■□□ 2.19
TRIM28-204ENST00000594806 USP28Q96RU2 1077 aa28.73■■■□□ 2.19
TRIM28-204ENST00000594806 NT5C3AQ9H0P0 336 aa28.73■■■□□ 2.19
TRIM28-204ENST00000594806 GPR32O75388 356 aa28.72■■■□□ 2.19
TRIM28-204ENST00000594806 NASPP49321 788 aaPredicted RBP28.72■■■□□ 2.19
TRIM28-204ENST00000594806 LPIN1Q14693 890 aa28.72■■■□□ 2.19
TRIM28-204ENST00000594806 SLC39A14Q15043 492 aa28.72■■■□□ 2.19
TRIM28-204ENST00000594806 POTEGQ6S5H5 508 aa28.72■■■□□ 2.19
TRIM28-204ENST00000594806 ZNF579Q8NAF0 562 aaKnown RBP28.72■■■□□ 2.19
TRIM28-204ENST00000594806 PIGOQ8TEQ8 1089 aa28.72■■■□□ 2.19
TRIM28-204ENST00000594806 IFIH1Q9BYX4 1025 aaKnown RBP28.72■■■□□ 2.19
TRIM28-204ENST00000594806 SLC4A7Q9Y6M7 1214 aa28.72■■■□□ 2.19
TRIM28-204ENST00000594806 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.71■■■□□ 2.19
TRIM28-204ENST00000594806 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.71■■■□□ 2.19
TRIM28-204ENST00000594806 VTNP04004 478 aa28.71■■■□□ 2.19
TRIM28-204ENST00000594806 GHRP10912 638 aa28.71■■■□□ 2.19
TRIM28-204ENST00000594806 MKRN4PQ13434 485 aaPredicted RBP28.71■■■□□ 2.19
TRIM28-204ENST00000594806 EMC2Q15006 297 aa28.71■■■□□ 2.19
TRIM28-204ENST00000594806 HYIQ5T013 277 aa28.71■■■□□ 2.19
TRIM28-204ENST00000594806 PHOSPHO2Q8TCD6 241 aa28.71■■■□□ 2.19
TRIM28-204ENST00000594806 MTRQ99707 1265 aa28.71■■■□□ 2.19
TRIM28-204ENST00000594806 SUCLA2Q9P2R7 463 aaPredicted RBP28.71■■■□□ 2.19
TRIM28-204ENST00000594806 KIAA1024Q9UPX6 916 aa28.71■■■□□ 2.19
TRIM28-204ENST00000594806 SRPRBQ9Y5M8 271 aaKnown RBP28.71■■■□□ 2.19
TRIM28-204ENST00000594806 ZBBXA8MT70 800 aa28.7■■■□□ 2.18
TRIM28-204ENST00000594806 ASAP2O43150 1006 aa28.7■■■□□ 2.18
TRIM28-204ENST00000594806 BRD1O95696 1058 aa28.7■■■□□ 2.18
TRIM28-204ENST00000594806 NLRP11P59045 1033 aaKnown RBP28.7■■■□□ 2.18
TRIM28-204ENST00000594806 ZNF410Q86VK4 478 aa28.7■■■□□ 2.18
TRIM28-204ENST00000594806 MMTAG2Q9BU76 263 aaKnown RBP28.7■■■□□ 2.18
TRIM28-204ENST00000594806 ATP6V0A4Q9HBG4 840 aa28.7■■■□□ 2.18
TRIM28-204ENST00000594806 DNM3Q9UQ16 869 aa28.7■■■□□ 2.18
TRIM28-204ENST00000594806 RANBP2P49792 3224 aaKnown RBP28.7■■■□□ 2.18
TRIM28-204ENST00000594806 MICAL3Q7RTP6 2002 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 UBA7P41226 1012 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 KCNJ6P48051 423 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 GPC3P51654 580 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 SMAD3P84022 425 aaKnown RBP28.69■■■□□ 2.18
TRIM28-204ENST00000594806 PKP1Q13835 747 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 KIZQ2M2Z5 673 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 PSPC1Q8WXF1 523 aaKnown RBP28.69■■■□□ 2.18
TRIM28-204ENST00000594806 SLC9A7Q96T83 725 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 FTHL17Q9BXU8 183 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 ADAMTS10Q9H324 1103 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 DDX19AQ9NUU7 478 aaKnown RBP28.69■■■□□ 2.18
TRIM28-204ENST00000594806 CXXC1Q9P0U4 656 aaPredicted RBP28.69■■■□□ 2.18
TRIM28-204ENST00000594806 GINS2Q9Y248 185 aa28.69■■■□□ 2.18
TRIM28-204ENST00000594806 PP2D1A8MPX8 630 aa28.68■■■□□ 2.18
TRIM28-204ENST00000594806 YEATS4O95619 227 aa28.68■■■□□ 2.18
TRIM28-204ENST00000594806 CDC25AP30304 524 aa28.68■■■□□ 2.18
TRIM28-204ENST00000594806 CEBPZQ03701 1054 aaKnown RBP28.68■■■□□ 2.18
TRIM28-204ENST00000594806 ECM1Q16610 540 aa28.68■■■□□ 2.18
TRIM28-204ENST00000594806 FOXD4L5Q5VV16 416 aaPredicted RBP28.68■■■□□ 2.18
TRIM28-204ENST00000594806 MCPH1Q8NEM0 835 aa28.68■■■□□ 2.18
TRIM28-204ENST00000594806 FOXD4L4Q8WXT5 416 aaPredicted RBP28.68■■■□□ 2.18
TRIM28-204ENST00000594806 CFAP45Q9UL16 551 aa28.68■■■□□ 2.18
TRIM28-204ENST00000594806 ARHGEF35A5YM69 484 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 GPR182O15218 404 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 RPS6KA5O75582 802 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 EIF4BP23588 611 aaKnown RBP28.67■■■□□ 2.18
TRIM28-204ENST00000594806 PAK2Q13177 524 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 DRP2Q13474 957 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 MXD4Q14582 209 aaPredicted RBP28.67■■■□□ 2.18
TRIM28-204ENST00000594806 STK38Q15208 465 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 CABP7Q86V35 215 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 LINC00301Q8NCQ3 95 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 CALML4Q96GE6 196 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 CDK5RAP3Q96JB5 506 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 OSMRQ99650 979 aa28.67■■■□□ 2.18
TRIM28-204ENST00000594806 OSBPL7Q9BZF2 842 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms