RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 JAKMIP3Q5VZ66 844 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 ZNF746Q6NUN9 644 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 SWSAP1Q6NVH7 229 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 SMAP1Q8IYB5 467 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 TRIM22Q8IYM9 498 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 BBXQ8WY36 941 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 UIMC1Q96RL1 719 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 ADAM2Q99965 735 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 RNF26Q9BY78 433 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 KCNH6Q9H252 994 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 CLEC1BQ9P126 229 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 ST3GAL5Q9UNP4 418 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 DENND3A2RUS2 1198 aa19.86■□□□□ 0.77
SHKBP1-203ENST00000594298 SMRP1Q8NCR6 262 aa19.86■□□□□ 0.77
SHKBP1-203ENST00000594298 ZNF577Q9BSK1 485 aa19.86■□□□□ 0.77
SHKBP1-203ENST00000594298 C22orf23Q9BZE7 217 aa19.86■□□□□ 0.77
SHKBP1-203ENST00000594298 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-203ENST00000594298 AAASQ9NRG9 546 aa19.86■□□□□ 0.77
SHKBP1-203ENST00000594298 PCDHB12Q9Y5F1 795 aa19.86■□□□□ 0.77
SHKBP1-203ENST00000594298 CDKL5O76039 1030 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 AK2P54819 239 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 FAM189BP81408 668 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 SSRP1Q08945 709 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 STK3Q13188 491 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 NTRK3Q16288 839 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 RNF135Q8IUD6 432 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 SLC26A6Q9BXS9 759 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 ELAC1Q9H777 363 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 NCOA5Q9HCD5 579 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 C6orf50Q9HD87 102 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 CEP131Q9UPN4 1083 aa19.85■□□□□ 0.77
SHKBP1-203ENST00000594298 GPR32O75388 356 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 GLP2RO95838 553 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 CIITAP33076 1130 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 NRIP1P48552 1158 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 KIZQ2M2Z5 673 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 FAM102BQ5T8I3 360 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 FAM228AQ86W67 206 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 CKAP2LQ8IYA6 745 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 REXO1Q8N1G1 1221 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 PHKBQ93100 1093 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 OSMRQ99650 979 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 TMEM161AQ9NX61 479 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 MUTYHQ9UIF7 546 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 PCDHA10Q9Y5I2 948 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 MYO7AQ13402 2215 aa19.84■□□□□ 0.77
SHKBP1-203ENST00000594298 FSD2A1L4K1 749 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 TBKBP1A7MCY6 615 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 ADAMTS3O15072 1205 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 PFKFB2O60825 505 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 PSAPP07602 524 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 GNA11P29992 359 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 DSC3Q14574 896 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 PKN1Q16512 942 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 PDE12Q6L8Q7 609 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 ZNF710Q8N1W2 664 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 CCDC148Q8NFR7 591 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 CDCA3Q99618 268 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 TLR9Q9NR96 1032 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.77
SHKBP1-203ENST00000594298 KIAA1671Q9BY89 1806 aa19.83■□□□□ 0.76
SHKBP1-203ENST00000594298 MAGEB2O15479 319 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 FGF18O76093 207 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 DEXIO95424 95 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 RBM25P49756 843 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 SPOUT1Q5T280 376 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 HFE2Q6ZVN8 426 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 RBM23Q86U06 439 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 FAM167AQ96KS9 214 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 TLE6Q9H808 572 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 ATP6V0A4Q9HBG4 840 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 TYW1Q9NV66 732 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 GABBR1Q9UBS5 961 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 TCEAL9Q9UHQ7 104 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 PCDHGC5Q9Y5F6 944 aa19.82■□□□□ 0.76
SHKBP1-203ENST00000594298 LOC730098B7Z3J9 87 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 FSCN2O14926 492 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 PPFIA3O75145 1194 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 VTNP04004 478 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 LAG3P18627 525 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 IBSPP21815 317 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 CBX2Q14781 532 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 PRR16Q569H4 304 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 METTL13Q8N6R0 699 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 LINC01465Q8N7H1 131 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 COLGALT1Q8NBJ5 622 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 BICD2Q8TD16 824 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 MICAL1Q8TDZ2 1067 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 EDAQ92838 391 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 LENG9Q96B70 501 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 MFSD14AQ96MC6 490 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 PPP1R16BQ96T49 567 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 CWH43Q9H720 699 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 SH3GLB2Q9NR46 395 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 BARX2Q9UMQ3 279 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 LZTS1Q9Y250 596 aa19.81■□□□□ 0.76
SHKBP1-203ENST00000594298 WDR64B1ANS9 1081 aa19.8■□□□□ 0.76
SHKBP1-203ENST00000594298 FGFR1P11362 822 aa19.8■□□□□ 0.76
SHKBP1-203ENST00000594298 PLCB3Q01970 1234 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms