RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 ZBTB42B2RXF5 422 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
SMAD4-214ENST00000592186 COL6A1P12109 1028 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 HOXC8P31273 242 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-214ENST00000592186 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
SMAD4-214ENST00000592186 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 C1orf53Q5VUE5 145 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 IER5Q5VY09 327 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 PLA2G4FQ68DD2 849 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 C1orf186Q6ZWK4 172 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 GPBP1Q86WP2 473 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 NME8Q8N427 588 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 SYAP1Q96A49 352 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-214ENST00000592186 PKNOX2Q96KN3 472 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 CEP89Q96ST8 783 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 C7orf25Q9BPX7 421 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 C11orf49Q9H6J7 331 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 DHX33Q9H6R0 707 aaKnown RBP11.86□□□□□ -0.51
SMAD4-214ENST00000592186 ATP6V0A4Q9HBG4 840 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 PDLIM7Q9NR12 457 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 SETD4Q9NVD3 440 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 PCDHA2Q9Y5H9 948 aa11.86□□□□□ -0.51
SMAD4-214ENST00000592186 GRIN2DO15399 1336 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 IGKV6-21A0A0C4DH24 114 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 PVALEFA0A1B0GWK0 134 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 ASAP2O43150 1006 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 SMC2O95347 1197 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 CDK7P50613 346 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 IGBP1P78318 339 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 ADAM17P78536 824 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 KLHL40Q2TBA0 621 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 SLC39A5Q6ZMH5 540 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 RSPH3Q86UC2 560 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 GPT2Q8TD30 523 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
SMAD4-214ENST00000592186 ABHD8Q96I13 439 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 DRC1Q96MC2 740 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 TOX2Q96NM4 488 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 MTRQ99707 1265 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 GTPBP4Q9BZE4 634 aaKnown RBP11.85□□□□□ -0.51
SMAD4-214ENST00000592186 C17orf75Q9HAS0 396 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 TUBE1Q9UJT0 475 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 ODF2LQ9ULJ1 636 aa11.85□□□□□ -0.51
SMAD4-214ENST00000592186 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 TMEM150BA6NC51 233 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 TLR3O15455 904 aaKnown RBP11.84□□□□□ -0.51
SMAD4-214ENST00000592186 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
SMAD4-214ENST00000592186 C22orf31O95567 290 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 SCP2P22307 547 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 AFMP43652 599 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 RTP1P59025 263 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 MDM2Q00987 491 aaPredicted RBP11.84□□□□□ -0.51
SMAD4-214ENST00000592186 MXD4Q14582 209 aaPredicted RBP11.84□□□□□ -0.51
SMAD4-214ENST00000592186 EMC2Q15006 297 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 PTGISQ16647 500 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 MARCH8Q5T0T0 291 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 EFCAB12Q6NXP0 572 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 ANKRD33Q7Z3H0 272 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 METTL13Q8N6R0 699 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 DDX12PQ92771 950 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
SMAD4-214ENST00000592186 TRIM9Q9C026 710 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 SUGCTQ9HAC7 445 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 COL4A3BPQ9Y5P4 624 aa11.84□□□□□ -0.51
SMAD4-214ENST00000592186 DOCK5Q9H7D0 1870 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 MYMKA6NI61 221 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 DCDC2CA8MYV0 355 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 USO1O60763 962 aaKnown RBP11.83□□□□□ -0.52
SMAD4-214ENST00000592186 CAND2O75155 1236 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 TBCAO75347 108 aaKnown RBP11.83□□□□□ -0.52
SMAD4-214ENST00000592186 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
SMAD4-214ENST00000592186 CYP2C9P11712 490 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 GAP43P17677 238 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 EN2P19622 333 aaPredicted RBP11.83□□□□□ -0.52
SMAD4-214ENST00000592186 ABCD1P33897 745 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 PTK7Q13308 1070 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 GIT2Q14161 759 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 SNX17Q15036 470 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 POSTNQ15063 836 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 PPP2R5AQ15172 486 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 GDF6Q6KF10 455 aaPredicted RBP11.83□□□□□ -0.52
SMAD4-214ENST00000592186 RPAINQ86UA6 219 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 SERINC5Q86VE9 423 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 CCDC65Q8IXS2 484 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 SLC17A8Q8NDX2 589 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 LRRC15Q8TF66 581 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 TRAPPC12Q8WVT3 735 aa11.83□□□□□ -0.52
SMAD4-214ENST00000592186 PSPC1Q8WXF1 523 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms