RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CUL5Q93034 780 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 AZI2Q9H6S1 392 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 FBXL21Q9UKT6 434 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 ERICH2A1L162 156 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 C2orf71A6NGG8 1288 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 C9IYK1 514 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 MEIS2O14770 477 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 RPLP2P05387 115 aaKnown RBP11.65□□□□□ -0.54
GGA3-219ENST00000584550 NT5C2P49902 561 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 MTMR1Q13613 665 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 SMC1AQ14683 1233 aaKnown RBP11.65□□□□□ -0.54
GGA3-219ENST00000584550 NECTIN1Q15223 517 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 ATAT1Q5SQI0 421 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 XRRA1Q6P2D8 792 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 MTHFD1LQ6UB35 978 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 ZDHHC14Q8IZN3 488 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 SIX5Q8N196 739 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 NME8Q8N427 588 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 MRPL43Q8N983 215 aaKnown RBP11.65□□□□□ -0.54
GGA3-219ENST00000584550 RIN2Q8WYP3 895 aaPredicted RBP11.65□□□□□ -0.54
GGA3-219ENST00000584550 GPRASP2Q96D09 838 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 C1orf112Q9NSG2 853 aa11.65□□□□□ -0.54
GGA3-219ENST00000584550 EP300Q09472 2414 aaPredicted RBP11.65□□□□□ -0.55
GGA3-219ENST00000584550 SMIM35A0A1B0GVV1 85 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 REC8O95072 547 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 CXCL14O95715 111 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 EOMESO95936 686 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 KLRC1P26715 233 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 PUM1Q14671 1186 aaKnown RBP eCLIP11.64□□□□□ -0.55
GGA3-219ENST00000584550 TMC5Q6UXY8 1006 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 DCLK2Q8N568 766 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 TMEM87AQ8NBN3 555 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 RNF169Q8NCN4 708 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 CYP2W1Q8TAV3 490 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 AUTS2Q8WXX7 1259 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 CDHR1Q96JP9 859 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 ZNF558Q96NG5 402 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 CASD1Q96PB1 797 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
GGA3-219ENST00000584550 CYP26B1Q9NR63 512 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
GGA3-219ENST00000584550 TMEM161AQ9NX61 479 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 SPG21Q9NZD8 308 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 CACNA1BQ00975 2339 aa11.64□□□□□ -0.55
GGA3-219ENST00000584550 KDM3AQ9Y4C1 1321 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 NT5C1B-RDH14C9J2C7 533 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 GPR182O15218 404 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 PRC1O43663 620 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 EPCAMP16422 314 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 STAT5BP51692 787 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 TDGQ13569 410 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 WTAPQ15007 396 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
GGA3-219ENST00000584550 KIZQ2M2Z5 673 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 MB21D2Q8IYB1 491 aaPredicted RBP11.63□□□□□ -0.55
GGA3-219ENST00000584550 ABI1Q8IZP0 508 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 TNPO1Q92973 898 aaKnown RBP11.63□□□□□ -0.55
GGA3-219ENST00000584550 OSMRQ99650 979 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 TMEM117Q9H0C3 514 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 SLC9A2Q9UBY0 812 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 UBIAD1Q9Y5Z9 338 aa11.63□□□□□ -0.55
GGA3-219ENST00000584550 EVPLQ92817 2033 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 NARSO43776 548 aaKnown RBP11.62□□□□□ -0.55
GGA3-219ENST00000584550 CFHP08603 1231 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 MCM5P33992 734 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 METAP2P50579 478 aaKnown RBP eCLIP11.62□□□□□ -0.55
GGA3-219ENST00000584550 ANTXR2P58335 489 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 ACTR2P61160 394 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 FAM189BP81408 668 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 COL9A3Q14050 684 aaPredicted RBP11.62□□□□□ -0.55
GGA3-219ENST00000584550 UBE2SQ16763 222 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 SPECC1Q5M775 1068 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 KIAA1841Q6NSI8 718 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 NFXL1Q6ZNB6 911 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 TRMT1LQ7Z2T5 733 aaKnown RBP11.62□□□□□ -0.55
GGA3-219ENST00000584550 FAM228AQ86W67 206 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 KIAA0319LQ8IZA0 1049 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 RTP3Q9BQQ7 232 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 KCNK12Q9HB15 430 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 JADE2Q9NQC1 790 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 RNF19AQ9NV58 838 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 NCOR2Q9Y618 2525 aa11.62□□□□□ -0.55
GGA3-219ENST00000584550 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
GGA3-219ENST00000584550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.61□□□□□ -0.55
GGA3-219ENST00000584550 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 VTNP04004 478 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 RFX1P22670 979 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 PPM1AP35813 382 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 TROAPQ12815 778 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 RSPO4Q2I0M5 234 aaPredicted RBP11.61□□□□□ -0.55
GGA3-219ENST00000584550 ADCK5Q3MIX3 580 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 ODR4Q5SWX8 454 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 PLPPR4Q7Z2D5 763 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms