RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CRYBB1P53674 252 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-219ENST00000580540 NLRP11P59045 1033 aaKnown RBP18.66■□□□□ 0.58
SREBF1-219ENST00000580540 HTRA4P83105 476 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-219ENST00000580540 EPHA7Q15375 998 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 PLA2G4FQ68DD2 849 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 FBXO18Q8NFZ0 1043 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 TMEM40Q8WWA1 233 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 NIFKQ9BYG3 293 aaKnown RBP18.66■□□□□ 0.58
SREBF1-219ENST00000580540 RGL1Q9NZL6 768 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 PCDHA12Q9UN75 941 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 GPR32O75388 356 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 STBD1O95210 358 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 CYP4A11Q02928 519 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 CTTNQ14247 550 aaKnown RBP18.65■□□□□ 0.58
SREBF1-219ENST00000580540 TARBP2Q15633 366 aaKnown RBP18.65■□□□□ 0.58
SREBF1-219ENST00000580540 ODR4Q5SWX8 454 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 RTN4RL1Q86UN2 441 aaPredicted RBP18.65■□□□□ 0.58
SREBF1-219ENST00000580540 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.65■□□□□ 0.58
SREBF1-219ENST00000580540 LINC01599Q8WXQ3 324 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 DYDC2Q96IM9 177 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 C17orf80Q9BSJ5 609 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 TMX1Q9H3N1 280 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 ST3GAL5Q9UNP4 418 aa18.65■□□□□ 0.58
SREBF1-219ENST00000580540 DENND3A2RUS2 1198 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 GPR182O15218 404 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 CD2BP2O95400 341 aaKnown RBP18.64■□□□□ 0.57
SREBF1-219ENST00000580540 DNM2P50570 870 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 ERVK-21P61565 698 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 GRB10Q13322 594 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 ZNF174Q15697 407 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 ANO5Q75V66 913 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 TPH2Q8IWU9 490 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 LINC01465Q8N7H1 131 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 GDPD5Q8WTR4 605 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 TMX3Q96JJ7 454 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 LXNQ9BS40 222 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 FOXP1Q9H334 677 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-219ENST00000580540 TTC12Q9H892 705 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-219ENST00000580540 ERVK-5Q9HDB9 667 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 LRFN2Q9ULH4 789 aa18.64■□□□□ 0.57
SREBF1-219ENST00000580540 NPEPPSP55786 919 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 DRP2Q13474 957 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 FAM228AQ86W67 206 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 FIBCD1Q8N539 461 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 FBXO22Q8NEZ5 403 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 SP7Q8TDD2 431 aaPredicted RBP18.63■□□□□ 0.57
SREBF1-219ENST00000580540 NLRP7Q8WX94 980 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 CEP170P1Q96L14 293 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 ADAM2Q99965 735 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 TSPYL2Q9H2G4 693 aaPredicted RBP18.63■□□□□ 0.57
SREBF1-219ENST00000580540 TMEM60Q9H2L4 133 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 PRDM6Q9NQX0 595 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 CYP26B1Q9NR63 512 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 CHD7Q9P2D1 2997 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 WRAP73Q9P2S5 460 aaPredicted RBP18.63■□□□□ 0.57
SREBF1-219ENST00000580540 MTCH2Q9Y6C9 303 aa18.63■□□□□ 0.57
SREBF1-219ENST00000580540 MGEA5O60502 916 aa18.62■□□□□ 0.57
SREBF1-219ENST00000580540 STAG3L1P0CL83 205 aa18.62■□□□□ 0.57
SREBF1-219ENST00000580540 SPIRE1Q08AE8 756 aa18.62■□□□□ 0.57
SREBF1-219ENST00000580540 SKIV2LQ15477 1246 aaKnown RBP18.62■□□□□ 0.57
SREBF1-219ENST00000580540 EIF2AK1Q9BQI3 630 aaKnown RBP18.62■□□□□ 0.57
SREBF1-219ENST00000580540 ADAMTS10Q9H324 1103 aa18.62■□□□□ 0.57
SREBF1-219ENST00000580540 ZSWIM4Q9H7M6 989 aa18.62■□□□□ 0.57
SREBF1-219ENST00000580540 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-219ENST00000580540 SUCLA2Q9P2R7 463 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-219ENST00000580540 KIF3AQ9Y496 699 aa18.62■□□□□ 0.57
SREBF1-219ENST00000580540 MAFO75444 373 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 EIF4BP23588 611 aaKnown RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 YWHABP31946 246 aaKnown RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 MCM2P49736 904 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 GPC3P51654 580 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 BTG3Q14201 252 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 PAN2Q504Q3 1202 aaKnown RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 XKR9Q5GH70 373 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 TTC38Q5R3I4 469 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 MCTP1Q6DN14 999 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 OTUD6AQ7L8S5 288 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 RHPN2Q8IUC4 686 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 NPAS4Q8IUM7 802 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 NOSTRINQ8IVI9 506 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 C4orf19Q8IY42 314 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 ZNF579Q8NAF0 562 aaKnown RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 IL27Q8NEV9 243 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 MTMR9Q96QG7 549 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 CEP89Q96ST8 783 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 JPH2Q9BR39 696 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 NOL7Q9UMY1 257 aaKnown RBP18.61■□□□□ 0.57
SREBF1-219ENST00000580540 PCDHB7Q9Y5E2 793 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 TTC3P53804 2025 aa18.61■□□□□ 0.57
SREBF1-219ENST00000580540 PRRC2BQ5JSZ5 2229 aaKnown RBP18.6■□□□□ 0.57
SREBF1-219ENST00000580540 ZBTB39O15060 712 aa18.6■□□□□ 0.57
SREBF1-219ENST00000580540 LPXNO60711 386 aa18.6■□□□□ 0.57
SREBF1-219ENST00000580540 CSDE1O75534 798 aaKnown RBP18.6■□□□□ 0.57
SREBF1-219ENST00000580540 SLITRK3O94933 977 aa18.6■□□□□ 0.57
SREBF1-219ENST00000580540 FGFR4P22455 802 aa18.6■□□□□ 0.57
SREBF1-219ENST00000580540 POLGP54098 1239 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-219ENST00000580540 EPC2Q52LR7 807 aa18.6■□□□□ 0.57
SREBF1-219ENST00000580540 TMEM192Q8IY95 271 aa18.6■□□□□ 0.57
SREBF1-219ENST00000580540 ZNF710Q8N1W2 664 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms