RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SMRP1Q8NCR6 262 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 BRF1Q92994 677 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 MSLNLQ96KJ4 702 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 JAKMIP1Q96N16 626 aaKnown RBP14.71□□□□□ -0.05
SF3B3-202ENST00000562722 SCLT1Q96NL6 688 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 MAP7D2Q96T17 732 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 ZMYND12Q9H0C1 365 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 TYW1Q9NV66 732 aaKnown RBP14.71□□□□□ -0.05
SF3B3-202ENST00000562722 CLEC1BQ9P126 229 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 HCSTQ9UBK5 93 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 AKT3Q9Y243 479 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 PCDHA10Q9Y5I2 948 aa14.71□□□□□ -0.05
SF3B3-202ENST00000562722 KIAA1671Q9BY89 1806 aa14.71□□□□□ -0.06
SF3B3-202ENST00000562722 ESYT2A0FGR8 921 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 C9IYK1 514 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 EYA4O95677 639 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 SRGAP2BP0DMP2 458 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 LAG3P18627 525 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 CLCN3P51790 818 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 COASYQ13057 564 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 HERC4Q5GLZ8 1057 aaPredicted RBP14.7□□□□□ -0.06
SF3B3-202ENST00000562722 HFE2Q6ZVN8 426 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 ALYREFQ86V81 257 aaKnown RBP14.7□□□□□ -0.06
SF3B3-202ENST00000562722 ABI1Q8IZP0 508 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 COLGALT1Q8NBJ5 622 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 RNF169Q8NCN4 708 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 BICD2Q8TD16 824 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 RASGRP4Q8TDF6 673 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 PHKBQ93100 1093 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 FAM167AQ96KS9 214 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 MFSD14AQ96MC6 490 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 TMEM161AQ9NX61 479 aa14.7□□□□□ -0.06
SF3B3-202ENST00000562722 USP15Q9Y4E8 981 aaPredicted RBP14.7□□□□□ -0.06
SF3B3-202ENST00000562722 MAFBQ9Y5Q3 323 aaPredicted RBP14.7□□□□□ -0.06
SF3B3-202ENST00000562722 WDR64B1ANS9 1081 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 ADAMTS3O15072 1205 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 MAGEB2O15479 319 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 CHMP2AO43633 222 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 GLP2RO95838 553 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 ZSCAN20P17040 1043 aaPredicted RBP14.69□□□□□ -0.06
SF3B3-202ENST00000562722 TMOD1P28289 359 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 NLRP11P59045 1033 aaKnown RBP14.69□□□□□ -0.06
SF3B3-202ENST00000562722 PLPP4Q5VZY2 271 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 EFCAB12Q6NXP0 572 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 BLOC1S2Q6QNY1 142 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 CCDC148Q8NFR7 591 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 CRYGNQ8WXF5 182 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 RPGRIP1Q96KN7 1286 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 ENTPD7Q9NQZ7 604 aa14.69□□□□□ -0.06
SF3B3-202ENST00000562722 PUF60Q9UHX1 559 aaKnown RBP14.69□□□□□ -0.06
SF3B3-202ENST00000562722 LOXHD1Q8IVV2 1947 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 FSD2A1L4K1 749 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 HOXA2O43364 376 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 PRPF3O43395 683 aaKnown RBP14.68□□□□□ -0.06
SF3B3-202ENST00000562722 GPR32O75388 356 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 ERVFC1P60507 584 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
SF3B3-202ENST00000562722 LRRC71Q8N4P6 559 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 EDAQ92838 391 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 ZNF668Q96K58 619 aaPredicted RBP14.68□□□□□ -0.06
SF3B3-202ENST00000562722 FBXL18Q96ME1 805 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 CDCA3Q99618 268 aaPredicted RBP14.68□□□□□ -0.06
SF3B3-202ENST00000562722 SLC26A6Q9BXS9 759 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 TMEM117Q9H0C3 514 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 ELAC1Q9H777 363 aaKnown RBP14.68□□□□□ -0.06
SF3B3-202ENST00000562722 NRBP2Q9NSY0 501 aa14.68□□□□□ -0.06
SF3B3-202ENST00000562722 GAS7O60861 476 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 OATP04181 439 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 CA8P35219 290 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 PRKCEQ02156 737 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 PKN1Q16512 942 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 DUSP6Q16828 381 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 PDE12Q6L8Q7 609 aaKnown RBP14.67□□□□□ -0.06
SF3B3-202ENST00000562722 LLGL2Q6P1M3 1020 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 LRRC43Q8N309 656 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 NLRP7Q8WX94 980 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
SF3B3-202ENST00000562722 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 TCF25Q9BQ70 676 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 PHF7Q9BWX1 381 aaPredicted RBP14.67□□□□□ -0.06
SF3B3-202ENST00000562722 CWH43Q9H720 699 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 DISC1Q9NRI5 854 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 VPS54Q9P1Q0 977 aa14.67□□□□□ -0.06
SF3B3-202ENST00000562722 MUC6Q6W4X9 2439 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 PLXNA4Q9HCM2 1894 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 LOC730098B7Z3J9 87 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 PPM1AP35813 382 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 PBX3P40426 434 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 TECP42680 631 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 NLRP5P59047 1200 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 CCT2P78371 535 aaKnown RBP14.66□□□□□ -0.06
SF3B3-202ENST00000562722 FAM189BP81408 668 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 NHLH1Q02575 133 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 KRT17Q04695 432 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 TBC1D8BQ0IIM8 1120 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 DSC3Q14574 896 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 SUGP1Q8IWZ8 645 aaKnown RBP14.66□□□□□ -0.06
SF3B3-202ENST00000562722 VN1R2Q8NFZ6 395 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 ZNF558Q96NG5 402 aa14.66□□□□□ -0.06
SF3B3-202ENST00000562722 TEKT3Q9BXF9 490 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms