RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NPR3P17342 541 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 RASA1P20936 1047 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 SLC1A4P43007 532 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 MRPL12P52815 198 aaKnown RBP6.27□□□□□ -1.41
HERC1-213ENST00000561359 LMNB2Q03252 620 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 LY6KQ17RY6 165 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 CCDC184Q52MB2 194 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 PPM1JQ5JR12 505 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 ZNF385CQ66K41 422 aaPredicted RBP6.27□□□□□ -1.41
HERC1-213ENST00000561359 CES5AQ6NT32 575 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 ANKRD54Q6NXT1 300 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 LLGL2Q6P1M3 1020 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 CTR9Q6PD62 1173 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 SYCE2Q6PIF2 218 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 SERINC5Q86VE9 423 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 TRIM50Q86XT4 487 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 SIX5Q8N196 739 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 GMCL1P1Q8NEA9 526 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 WHAMMQ8TF30 809 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 ATP6V0A1Q93050 837 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 SECISBP2LQ93073 1101 aaKnown RBP6.27□□□□□ -1.41
HERC1-213ENST00000561359 CDCA3Q99618 268 aaPredicted RBP6.27□□□□□ -1.41
HERC1-213ENST00000561359 OSBPL7Q9BZF2 842 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 ERVK-5Q9HDB9 667 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 USP18Q9UMW8 372 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 PCDHGA11Q9Y5H2 935 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 MRPL42Q9Y6G3 142 aaKnown RBP6.27□□□□□ -1.41
HERC1-213ENST00000561359 NLRC5Q86WI3 1866 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 UNC79Q9P2D8 2635 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 SPEGQ15772 3267 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 A6NJY4 79 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 NFIBO00712 420 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 ATP9BO43861 1147 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 SURF6O75683 361 aaKnown RBP6.26□□□□□ -1.41
HERC1-213ENST00000561359 TTLL1O95922 423 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 F2P00734 622 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 GNAI2P04899 355 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 SP9P0CG40 484 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 HOXB8P17481 243 aaPredicted RBP6.26□□□□□ -1.41
HERC1-213ENST00000561359 MCCP23508 829 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 ARHGAP1Q07960 439 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 DUSP6Q16828 381 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 PAN2Q504Q3 1202 aaKnown RBP6.26□□□□□ -1.41
HERC1-213ENST00000561359 CCDC62Q6P9F0 684 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 SEPT14Q6ZU15 432 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 KCTD1Q719H9 257 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 TDRD5Q8NAT2 981 aaKnown RBP6.26□□□□□ -1.41
HERC1-213ENST00000561359 SUMF1Q8NBK3 374 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 MKL1Q969V6 931 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 CEP95Q96GE4 821 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 NECTIN4Q96NY8 510 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 API5Q9BZZ5 524 aaKnown RBP6.26□□□□□ -1.41
HERC1-213ENST00000561359 POMKQ9H5K3 350 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 RC3H2Q9HBD1 1191 aaKnown RBP6.26□□□□□ -1.41
HERC1-213ENST00000561359 MTMR4Q9NYA4 1195 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 CDH22Q9UJ99 828 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 ANGPTL2Q9UKU9 493 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 NOB1Q9ULX3 412 aaKnown RBP6.26□□□□□ -1.41
HERC1-213ENST00000561359 SLC4A4Q9Y6R1 1079 aa6.26□□□□□ -1.41
HERC1-213ENST00000561359 ATG2AQ2TAZ0 1938 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 TCRBV5S4A2TA0A5A2 114 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 C17orf102A2RUQ5 167 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 HAS3O00219 553 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 GOLIM4O00461 696 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 DGKIO75912 1065 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 ICAM1P05362 532 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 EDNRBP24530 442 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 ATP1A2P50993 1020 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 MARSP56192 900 aaKnown RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 ALDH1L2Q3SY69 923 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 ARSJQ5FYB0 599 aaPredicted RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 SPECC1Q5M775 1068 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 SPOUT1Q5T280 376 aaKnown RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 SLC30A10Q6XR72 485 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 RNF207Q6ZRF8 634 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 ZNF444Q8N0Y2 327 aaPredicted RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.25□□□□□ -1.41
HERC1-213ENST00000561359 DNERQ8NFT8 737 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 GLMNQ92990 594 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 ZNF689Q96CS4 500 aaPredicted RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 DNAJC2Q99543 621 aaKnown RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 ENAMQ9NRM1 1142 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 PRR12Q9ULL5 1215 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 SYNPO2Q9UMS6 1093 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 MTMR7Q9Y216 660 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 RBM19Q9Y4C8 960 aaKnown RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 RALGAPA2Q2PPJ7 1873 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 GCN1Q92616 2671 aaKnown RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 ASH1LQ9NR48 2969 aaKnown RBP6.25□□□□□ -1.41
HERC1-213ENST00000561359 MYH8P13535 1937 aa6.25□□□□□ -1.41
HERC1-213ENST00000561359 IGKV6D-41A0A0C4DH26 115 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 MINDY4BA8MYZ0 360 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 CDK2AP1O14519 115 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 ENPP3O14638 875 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 TREHO43280 583 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 PLA2G6O60733 806 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 CAND2O75155 1236 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 PRDM1O75626 825 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 DCNP07585 359 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms