RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 RAB34Q9BZG1 259 aa17.72■□□□□ 0.43
RABGGTA-206ENST00000558649 MICAL3Q7RTP6 2002 aa17.72■□□□□ 0.43
RABGGTA-206ENST00000558649 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 VWA3AA6NCI4 1184 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 SPATA31C1P0DKV0 1188 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 ATP2A2P16615 1042 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 CD52P31358 61 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 PRPHP41219 470 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 WDR5P61964 334 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 DRP2Q13474 957 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 TSHZ1Q6ZSZ6 1077 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 LINC01465Q8N7H1 131 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 SNX29Q8TEQ0 813 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 SLC7A3Q8WY07 619 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 CEP89Q96ST8 783 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 OSMRQ99650 979 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 CDHR5Q9HBB8 845 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 TUFT1Q9NNX1 390 aa17.71■□□□□ 0.43
RABGGTA-206ENST00000558649 MAFO75444 373 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 CDC25AP30304 524 aa17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 DNM2P50570 870 aa17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 RABGGTBP53611 331 aa17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 NLRP11P59045 1033 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 DEFB103AP81534 67 aa17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 PAK2Q13177 524 aa17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 TMCO2Q7Z6W1 182 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 IGSF22Q8N9C0 903 aa17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 POLR3CQ9BUI4 534 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
RABGGTA-206ENST00000558649 ABHD14A-ACY1A0A1B0GW23 586 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 GPR32O75388 356 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 LYPLA2O95372 231 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 RPA1P27694 616 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 PBX2P40425 430 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 RFC5P40937 340 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 SMAD3P84022 425 aaKnown RBP17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 PDIA5Q14554 519 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 EMC2Q15006 297 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 FAM117BQ6P1L5 589 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 RHPN2Q8IUC4 686 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 TMEM40Q8WWA1 233 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 NLRP7Q8WX94 980 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 APBB2Q92870 758 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 TMEM143Q96AN5 459 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 SLC9A7Q96T83 725 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 JPH2Q9BR39 696 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 ZSCAN16Q9H4T2 348 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 AGO3Q9H9G7 860 aaKnown RBP17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 SUCLA2Q9P2R7 463 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 KDM3AQ9Y4C1 1321 aa17.69■□□□□ 0.42
RABGGTA-206ENST00000558649 IGKV6-21A0A0C4DH24 114 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 USO1O60763 962 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 BMP15O95972 392 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 GPC3P51654 580 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 CRYBB1P53674 252 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 NFX1Q12986 1120 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 BECN1Q14457 450 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 ECM1Q16610 540 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 KRT79Q5XKE5 535 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 MTRQ99707 1265 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 DHX33Q9H6R0 707 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 ANKEF1Q9NU02 776 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 PADI3Q9ULW8 664 aa17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 NOC2LQ9Y3T9 749 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-206ENST00000558649 EFCAB14O75071 495 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 RPS6KA5O75582 802 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 ZSCAN22P10073 491 aaPredicted RBP17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 IBSPP21815 317 aaPredicted RBP17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 DNAJB2P25686 324 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 RARRES1P49788 294 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 PKP1Q13835 747 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 KSR1Q8IVT5 923 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 EXOC8Q8IYI6 725 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 MYOCDQ8IZQ8 938 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 NLRP4Q96MN2 994 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 NACC1Q96RE7 527 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 ZBED2Q9BTP6 218 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 PBX4Q9BYU1 374 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 ATP6V0A4Q9HBG4 840 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 DDX19AQ9NUU7 478 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 KIAA1024Q9UPX6 916 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 PPME1Q9Y570 386 aa17.67■□□□□ 0.42
RABGGTA-206ENST00000558649 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 CSDE1O75534 798 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 UPP2O95045 317 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 AMHP03971 560 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 MYOGP15173 224 aa17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 MARCKSP29966 332 aaPredicted RBP17.66■□□□□ 0.42
RABGGTA-206ENST00000558649 Q7L0L9 218 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms