RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 CTNNBL1Q8WYA6 563 aaPredicted RBP19.28■□□□□ 0.68
RCCD1-204ENST00000555737 ARHGEF26Q96DR7 871 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 EDEM3Q9BZQ6 932 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 NT5C3AQ9H0P0 336 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 DNM3Q9UQ16 869 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 POLD1P28340 1107 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 GBP2P32456 591 aaPredicted RBP19.28■□□□□ 0.68
RCCD1-204ENST00000555737 SMTNP53814 917 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 KNOP1Q1ED39 458 aaKnown RBP19.28■□□□□ 0.68
RCCD1-204ENST00000555737 TPH2Q8IWU9 490 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 MYCT1Q8N699 235 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 LRRC57Q8N9N7 239 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 EPS8L3Q8TE67 593 aaKnown RBP19.28■□□□□ 0.68
RCCD1-204ENST00000555737 STK38LQ9Y2H1 464 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 DAAM1Q9Y4D1 1078 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 LRP5O75197 1615 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 DCCP43146 1447 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 GNA14O95837 355 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 SPATS2Q86XZ4 545 aaKnown RBP19.28■□□□□ 0.68
RCCD1-204ENST00000555737 CD302Q8IX05 232 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 RPGRQ92834 1020 aaKnown RBP19.28■□□□□ 0.68
RCCD1-204ENST00000555737 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 THAP2Q9H0W7 228 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 ACP6Q9NPH0 428 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 L3MBTL1Q9Y468 752 aa19.28■□□□□ 0.68
RCCD1-204ENST00000555737 PNMA6FA0A0J9YX94 578 aa19.27■□□□□ 0.68
RCCD1-204ENST00000555737 RGS16O15492 202 aaPredicted RBP19.27■□□□□ 0.68
RCCD1-204ENST00000555737 MARCKSL1P49006 195 aa19.27■□□□□ 0.68
RCCD1-204ENST00000555737 CTTNBP2NLQ9P2B4 639 aa19.27■□□□□ 0.68
RCCD1-204ENST00000555737 SHANK3Q9BYB0 1731 aa19.27■□□□□ 0.68
RCCD1-204ENST00000555737 DRAP1Q14919 205 aaPredicted RBP19.27■□□□□ 0.67
RCCD1-204ENST00000555737 DENND2CQ68D51 928 aa19.27■□□□□ 0.67
RCCD1-204ENST00000555737 NT5DC3Q86UY8 548 aa19.27■□□□□ 0.67
RCCD1-204ENST00000555737 CPNE8Q86YQ8 564 aa19.27■□□□□ 0.67
RCCD1-204ENST00000555737 LRRC34Q8IZ02 419 aa19.27■□□□□ 0.67
RCCD1-204ENST00000555737 SEMA4AQ9H3S1 761 aa19.27■□□□□ 0.67
RCCD1-204ENST00000555737 A0A1B0GUL6 1792 aa19.27■□□□□ 0.67
RCCD1-204ENST00000555737 MESDQ14696 234 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 TRIP13Q15645 432 aaPredicted RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 SYN2Q92777 582 aaPredicted RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 BTBD6Q96KE9 485 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 RUSC1Q9BVN2 902 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 PCIF1Q9H4Z3 704 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 DNAJC12Q9UKB3 198 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 SUFUQ9UMX1 484 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 CLSTN1O94985 981 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 CLNS1AP54105 237 aaKnown RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 SNX1Q13596 522 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 SPICE1Q8N0Z3 855 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 KIF2BQ8N4N8 673 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 LNX1Q8TBB1 728 aaPredicted RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 ACTRT1Q8TDG2 376 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 LMBR1Q8WVP7 490 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 CHMP6Q96FZ7 201 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 XPO6Q96QU8 1125 aaKnown RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 ANO3Q9BYT9 981 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 KCNK9Q9NPC2 374 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 DDX4Q9NQI0 724 aaKnown RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 TMEM59LQ9UK28 342 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 MYH14Q7Z406 1995 aaKnown RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 TNFAIP3P21580 790 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 SEMA3FQ13275 785 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 GIT2Q14161 759 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 QRICH1Q2TAL8 776 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 GDAP1Q8TB36 358 aa19.26■□□□□ 0.67
RCCD1-204ENST00000555737 INTS9Q9NV88 658 aaKnown RBP19.26■□□□□ 0.67
RCCD1-204ENST00000555737 STRCP1A6NGW2 1772 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 ABCB11O95342 1321 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 ACSL3O95573 720 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 TM4SF1P30408 202 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 BIRC3Q13489 604 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 MTMR3Q13615 1198 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 NEDD9Q14511 834 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 ACCSLQ4AC99 568 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 SNED1Q8TER0 1413 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 POP1Q99575 1024 aaKnown RBP19.25■□□□□ 0.67
RCCD1-204ENST00000555737 PCDHA2Q9Y5H9 948 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 RASSF9O75901 435 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 EZRP15311 586 aaKnown RBP19.25■□□□□ 0.67
RCCD1-204ENST00000555737 HOXD13P35453 343 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 DOK7Q18PE1 504 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 COBLL1Q53SF7 1204 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 FAM228AQ86W67 206 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 CCDC197Q8NCU1 140 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 ARHGEF1Q92888 912 aaKnown RBP19.25■□□□□ 0.67
RCCD1-204ENST00000555737 ADAM33Q9BZ11 813 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 TBK1Q9UHD2 729 aa19.25■□□□□ 0.67
RCCD1-204ENST00000555737 RBM5P52756 815 aaKnown RBP eCLIP19.24■□□□□ 0.67
RCCD1-204ENST00000555737 BYSLQ13895 437 aaKnown RBP19.24■□□□□ 0.67
RCCD1-204ENST00000555737 DCAF12L1Q5VU92 463 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 C6orf89Q6UWU4 347 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 NSMFQ6X4W1 530 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 ALG3Q92685 438 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 KRT35Q92764 455 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 SLC24A3Q9HC58 644 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 ANKRD36CQ5JPF3 1778 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 DDX39AO00148 427 aaKnown RBP19.24■□□□□ 0.67
RCCD1-204ENST00000555737 TTLL1O95922 423 aa19.24■□□□□ 0.67
RCCD1-204ENST00000555737 PMS2P54278 862 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms