RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CHAC2Q8WUX2 184 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 FOXB1Q99853 325 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 SSBP3Q9BWW4 388 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-213ENST00000554776 ZDHHC5Q9C0B5 715 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 ZMAT4Q9H898 229 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 FBXO10Q9UK96 956 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 ZDHHC9Q9Y397 364 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 NCANO14594 1321 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 MAFO75444 373 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 FKBP9O95302 570 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 PRLP01236 227 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 CYP17A1P05093 508 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 ZNF888P0CJ79 500 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 CDKN1CP49918 316 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 PPP2CBP62714 309 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 PPP2CAP67775 309 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 SMAD3P84022 425 aaKnown RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 CD83Q01151 205 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 PLP2Q04941 152 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 FAM50AQ14320 339 aaKnown RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 USP10Q14694 798 aaKnown RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 EPHA7Q15375 998 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 CT47A1Q5JQC4 288 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 TMEM200BQ69YZ2 307 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 FKBP9P1Q75LS8 142 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 DDX46Q7L014 1031 aaKnown RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 GPR155Q7Z3F1 870 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 CALML6Q8TD86 181 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 E2F7Q96AV8 911 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 GPR101Q96P66 508 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-213ENST00000554776 CARD11Q9BXL7 1154 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 SPTLC3Q9NUV7 552 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 SLC4A7Q9Y6M7 1214 aa4.33□□□□□ -1.72
SCFD1-213ENST00000554776 K7ESM1 405 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 B4GALT4O60513 344 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 CNOT4O95628 575 aaKnown RBP4.32□□□□□ -1.72
SCFD1-213ENST00000554776 EYA4O95677 639 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 ADCY8P40145 1251 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 KPNA1P52294 538 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-213ENST00000554776 IL2P60568 153 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 PHC1P78364 1004 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 NFKB2Q00653 900 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 OCRLQ01968 901 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 EFEMP1Q12805 493 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 STRN3Q13033 797 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 EIF4HQ15056 248 aaKnown RBP4.32□□□□□ -1.72
SCFD1-213ENST00000554776 ZNF827Q17R98 1081 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 GPR158Q5T848 1215 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 ARHGEF18Q6ZSZ5 1173 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 DDX42Q86XP3 938 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCFD1-213ENST00000554776 IFNL2Q8IZJ0 200 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 PRPF38AQ8NAV1 312 aaKnown RBP4.32□□□□□ -1.72
SCFD1-213ENST00000554776 WDR48Q8TAF3 677 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 STAG1Q8WVM7 1258 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 ERCC4Q92889 916 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-213ENST00000554776 BRINP2Q9C0B6 783 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 IFT22Q9H7X7 185 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 EMC7Q9NPA0 242 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 TOMM22Q9NS69 142 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 PPP4R1LQ9P1A2 415 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 PTPN22Q9Y2R2 807 aa4.32□□□□□ -1.72
SCFD1-213ENST00000554776 ZNF536O15090 1300 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 A0A0G2JNJ9 132 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 UBA6A0AVT1 1052 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-213ENST00000554776 NEMP1O14524 444 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 HMGCRP04035 888 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 APEX1P27695 318 aaKnown RBP4.31□□□□□ -1.72
SCFD1-213ENST00000554776 ID4P47928 161 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 MOGSQ13724 837 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 LRRC32Q14392 662 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 SART3Q15020 963 aaKnown RBP4.31□□□□□ -1.72
SCFD1-213ENST00000554776 TERF2Q15554 542 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 SLFN13Q68D06 897 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 TRIM68Q6AZZ1 485 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 GRAMD4Q6IC98 578 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 OTOP2Q7RTS6 562 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 NME9Q86XW9 330 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 USP7Q93009 1102 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 SCYL1Q96KG9 808 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 TTC1Q99614 292 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 MEGF9Q9H1U4 602 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 SEC61A2Q9H9S3 476 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
SCFD1-213ENST00000554776 Q9UFV3 132 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 APOBEC2Q9Y235 224 aaKnown RBP4.31□□□□□ -1.72
SCFD1-213ENST00000554776 ATP8A1Q9Y2Q0 1164 aa4.31□□□□□ -1.72
SCFD1-213ENST00000554776 ZEB2O60315 1214 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 BRINP1O60477 761 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 BUD31P41223 144 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-213ENST00000554776 RGS3P49796 1198 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 KCNQ1P51787 676 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 SLC6A3Q01959 620 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 ROM1Q03395 351 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 MYBPC3Q14896 1274 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 ZMAT1Q5H9K5 638 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 TTC38Q5R3I4 469 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 SLFN12LQ6IEE8 588 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 GLB1LQ6UWU2 654 aa4.3□□□□□ -1.72
SCFD1-213ENST00000554776 LHFPL2Q6ZUX7 228 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms