RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SDSP20132 328 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 GPTP24298 496 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 ECE1P42892 770 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 NEK4P51957 841 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 NFKB2Q00653 900 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 AMPD3Q01432 767 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TEFQ10587 303 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 NTRK3Q16288 839 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 PARP10Q53GL7 1025 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 DACT2Q5SW24 774 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 ACBD5Q5T8D3 534 aaPredicted RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 EEF1DP3Q658K8 133 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 WWC2Q6AWC2 1192 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 RCSD1Q6JBY9 416 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 UBE2R2Q712K3 238 aaPredicted RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 DDX46Q7L014 1031 aaKnown RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 COPS6Q7L5N1 327 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TMPRSS7Q7RTY8 843 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 BRAPQ7Z569 592 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 MTDHQ86UE4 582 aaKnown RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 LRRTM3Q86VH5 581 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 THNSL2Q86YJ6 484 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 CREG2Q8IUH2 290 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 SPACA3Q8IXA5 215 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TTC5Q8N0Z6 440 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 PPM1KQ8N3J5 372 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 CERS5Q8N5B7 392 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 NAT16Q8N8M0 369 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 KREMEN2Q8NCW0 462 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 GSTCDQ8NEC7 633 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 SLC7A14Q8TBB6 771 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 ASB11Q8WXH4 323 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 DDX1Q92499 740 aaKnown RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 DIO2Q92813 273 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 C1orf159Q96HA4 380 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 HRASLS5Q96KN8 279 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 ZFYVE21Q9BQ24 234 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 MCMBPQ9BTE3 642 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TARS2Q9BW92 718 aaKnown RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 CDADC1Q9BWV3 514 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 SLC12A9Q9BXP2 914 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 FOXP3Q9BZS1 431 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TRIM39Q9HCM9 518 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 GPR27Q9NS67 375 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 SEMA3GQ9NS98 782 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 CLEC1BQ9P126 229 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 MCM8Q9UJA3 840 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 MAPRE3Q9UPY8 281 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TRAF6Q9Y4K3 522 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 SCN9AQ15858 1988 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 ZNF646O15015 1829 aaPredicted RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 KIAA0100Q14667 2235 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 PITPNM2Q9BZ72 1349 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 NPHP3-ACAD11A0A0J9YXS1 232 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 WASH4PA8MWX3 477 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 PPIP5K2O43314 1243 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 MYO1BO43795 1136 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 FKTNO75072 461 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 DNAJC8O75937 253 aaPredicted RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 NPTXRO95502 500 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 CSF1RP07333 972 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 PLS3P13797 630 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 FOSL1P15407 271 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 RPS12P25398 132 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 KLRK1P26718 216 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 RPL10P27635 214 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 CTGFP29279 349 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 TMPOP42166 694 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 GTF2A2P52657 109 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 GPR85P60893 370 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 RBM10P98175 930 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 GUCY1A3Q02108 690 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 PRKCQQ04759 706 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 EGR3Q06889 387 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 KCNAB2Q13303 367 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 MOGSQ13724 837 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 HABP4Q5JVS0 413 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 RTP2Q5QGT7 225 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 KCNT2Q6UVM3 1135 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 CYP2R1Q6VVX0 501 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 C15orf52Q6ZUT6 534 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 FGD2Q7Z6J4 655 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 CTU1Q7Z7A3 348 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 PLD6Q8N2A8 252 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 UBR7Q8N806 425 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 NPLOC4Q8TAT6 608 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 FRS2Q8WU20 508 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 JDP2Q8WYK2 163 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 CDCA5Q96FF9 252 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 CHAMP1Q96JM3 812 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 TEPSINQ96N21 525 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 MMP19Q99542 508 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 ALG1Q9BT22 464 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 PHF20Q9BVI0 1012 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 UTP14AQ9BVJ6 771 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 NYXQ9GZU5 481 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 GBA2Q9HCG7 927 aaPredicted RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 ZC3H7BQ9UGR2 993 aaKnown RBP3.04□□□□□ -1.92
CPSF6-207ENST00000551516 VAV3Q9UKW4 847 aa3.04□□□□□ -1.92
CPSF6-207ENST00000551516 ABT1Q9ULW3 272 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms