RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 TNNI3KQ59H18 835 aa8.64□□□□□ -1.03
CHPT1-203ENST00000546873 G2E3Q7L622 706 aa8.64□□□□□ -1.03
CHPT1-203ENST00000546873 RPAP2Q8IXW5 612 aaPredicted RBP8.64□□□□□ -1.03
CHPT1-203ENST00000546873 SP8Q8IXZ3 490 aa8.64□□□□□ -1.03
CHPT1-203ENST00000546873 FAM169BQ8N8A8 192 aa8.64□□□□□ -1.03
CHPT1-203ENST00000546873 BVESQ8NE79 360 aa8.64□□□□□ -1.03
CHPT1-203ENST00000546873 SUSD2Q9UGT4 822 aa8.64□□□□□ -1.03
CHPT1-203ENST00000546873 IRS2Q9Y4H2 1338 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 ZC3H12DA2A288 527 aaKnown RBP8.63□□□□□ -1.03
CHPT1-203ENST00000546873 KCNQ3O43525 872 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 KCNH1O95259 989 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 UBTFL1P0CB47 393 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-203ENST00000546873 RBM25P49756 843 aaKnown RBP8.63□□□□□ -1.03
CHPT1-203ENST00000546873 NEXNQ0ZGT2 675 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 LCE4AQ5TA78 99 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 CPNE8Q86YQ8 564 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 TMEFF1Q8IYR6 380 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 DNAAF4Q8WXU2 420 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 DDX21Q9NR30 783 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHPT1-203ENST00000546873 RWDD3Q9Y3V2 267 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 TAF1LQ8IZX4 1826 aa8.63□□□□□ -1.03
CHPT1-203ENST00000546873 UBR3Q6ZT12 1888 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 KIF13BQ9NQT8 1826 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 HSPA8P11142 646 aaKnown RBP8.62□□□□□ -1.03
CHPT1-203ENST00000546873 VEGFAP15692 232 aaPredicted RBP8.62□□□□□ -1.03
CHPT1-203ENST00000546873 SLC39A6Q13433 755 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 ANKRD44Q8N8A2 993 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 ALG3Q92685 438 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 PEX11GQ96HA9 241 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 ZNF496Q96IT1 587 aaPredicted RBP8.62□□□□□ -1.03
CHPT1-203ENST00000546873 KCNC2Q96PR1 638 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 MEIS3Q99687 375 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 RNF38Q9H0F5 515 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 EPB41L4AQ9HCS5 686 aaPredicted RBP8.62□□□□□ -1.03
CHPT1-203ENST00000546873 APEX2Q9UBZ4 518 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 EMC9Q9Y3B6 208 aa8.62□□□□□ -1.03
CHPT1-203ENST00000546873 CNTNAP1P78357 1384 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 ITGB4P16144 1822 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 ARFGEF2Q9Y6D5 1785 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 TRIM13O60858 407 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 GLI4P10075 376 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 NCAM1P13591 858 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 HMGB2P26583 209 aaKnown RBP8.61□□□□□ -1.03
CHPT1-203ENST00000546873 SLC9A5Q14940 896 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 CEP85Q6P2H3 762 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 NETO2Q8NC67 525 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 TEX13AQ9BXU3 409 aaPredicted RBP8.61□□□□□ -1.03
CHPT1-203ENST00000546873 UPF2Q9HAU5 1272 aaKnown RBP8.61□□□□□ -1.03
CHPT1-203ENST00000546873 ACTR10Q9NZ32 417 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 GULP1Q9UBP9 304 aa8.61□□□□□ -1.03
CHPT1-203ENST00000546873 IBTKQ9P2D0 1353 aaPredicted RBP8.61□□□□□ -1.03
CHPT1-203ENST00000546873 BRCA1P38398 1863 aaKnown RBP8.6□□□□□ -1.03
CHPT1-203ENST00000546873 AFDNP55196 1824 aaKnown RBP8.6□□□□□ -1.03
CHPT1-203ENST00000546873 PI4KAP2A4QPH2 592 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 EIF5BO60841 1220 aaKnown RBP8.6□□□□□ -1.03
CHPT1-203ENST00000546873 LIMS1P48059 325 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 NUCB1Q02818 461 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 VMACQ2NL98 169 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 LARP1BQ659C4 914 aaKnown RBP8.6□□□□□ -1.03
CHPT1-203ENST00000546873 KSR2Q6VAB6 950 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 CHD1LQ86WJ1 897 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 PI4KAP1Q8N8J0 262 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHPT1-203ENST00000546873 LRP2BPQ9P2M1 347 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 MRVI1Q9Y6F6 885 aa8.6□□□□□ -1.03
CHPT1-203ENST00000546873 GLTPD2A6NH11 291 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 B8ZZF3 427 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 SMAD7O15105 426 aaKnown RBP8.59□□□□□ -1.03
CHPT1-203ENST00000546873 MYL6BP14649 208 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 TCF3P15923 654 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 IGFBP6P24592 240 aaPredicted RBP8.59□□□□□ -1.03
CHPT1-203ENST00000546873 SCRN1Q12765 414 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 ANKRD45Q5TZF3 282 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 LINC01356Q8N9X3 169 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 RELTQ969Z4 430 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 TSPAN17Q96FV3 270 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 KRTAP4-7Q9BYR0 210 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 C9orf78Q9NZ63 289 aaPredicted RBP8.59□□□□□ -1.03
CHPT1-203ENST00000546873 CLEC1BQ9P126 229 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 MAP3K2Q9Y2U5 619 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 HCFC2Q9Y5Z7 792 aa8.59□□□□□ -1.03
CHPT1-203ENST00000546873 STARD3NLO95772 234 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 ANXA1P04083 346 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 PLS3P13797 630 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 CHRNA5P30532 468 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 FOXO4P98177 505 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 AIMP1Q12904 312 aaKnown RBP8.58□□□□□ -1.04
CHPT1-203ENST00000546873 ITPK1Q13572 414 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 DALRD3Q5D0E6 543 aaKnown RBP8.58□□□□□ -1.04
CHPT1-203ENST00000546873 WWC2Q6AWC2 1192 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 GTF2IRD2BQ6EKJ0 949 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 KIF6Q6ZMV9 814 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 GTF2IRD2Q86UP8 949 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 TRIM59Q8IWR1 403 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 LINS1Q8NG48 757 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
CHPT1-203ENST00000546873 LNPKQ9C0E8 428 aa8.58□□□□□ -1.04
CHPT1-203ENST00000546873 CYP26B1Q9NR63 512 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms