RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CLEC10AQ8IUN9 316 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 NLGN1Q8N2Q7 840 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 LARGE2Q8N3Y3 721 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 CCDC89Q8N998 374 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 DCAF4Q8WV16 495 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 JDP2Q8WYK2 163 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 RAB20Q9NX57 234 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 TBK1Q9UHD2 729 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 POC1B-GALNT4F8VUJ3 575 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 PPIP5K2O43314 1243 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 FTLP02792 175 aaPredicted RBP8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 TROVE2P10155 538 aaKnown RBP eCLIP8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 PMS2P54278 862 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 GALCP54803 685 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 KAZNQ674X7 775 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 RCSD1Q6JBY9 416 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 USP38Q8NB14 1042 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 RAB3IPQ96QF0 476 aaPredicted RBP8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 HSD3B7Q9H2F3 369 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 RGPD1P0DJD0 1748 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 NDC80O14777 642 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 GH2P01242 217 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 VEGFAP15692 232 aaPredicted RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 GPSM2P81274 684 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 LMNB2Q03252 620 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 MEA1Q16626 185 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 TSNAXIP1Q2TAA8 658 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 FBXW10Q5XX13 1052 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 DDX42Q86XP3 938 aaKnown RBP eCLIP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 ARL8AQ96BM9 186 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 RNPC3Q96LT9 517 aaKnown RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 PPP1R12CQ9BZL4 782 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 TXNDC16Q9P2K2 825 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 NALCNQ8IZF0 1738 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 FAM187AA6NFU0 413 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 TTI1O43156 1089 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 SOX5P35711 763 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 GCLMP48507 274 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 CCDC62Q6P9F0 684 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 TBC1D1Q86TI0 1168 aaPredicted RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 PALM2Q8IXS6 379 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 MARCH10Q8NA82 808 aaPredicted RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 ZNF473Q8WTR7 871 aaKnown RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 CHMP6Q96FZ7 201 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 MPHOSPH6Q99547 160 aaKnown RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 GOLPH3Q9H4A6 298 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 RGL1Q9NZL6 768 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 SEL1LQ9UBV2 794 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 TRIM49P0CI25 452 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 TRIM49CP0CI26 452 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 ANXA13P27216 316 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 BFSP1Q12934 665 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 NFIXQ14938 502 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 TRIP13Q15645 432 aaPredicted RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGEF16Q5VV41 709 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 PROCA1Q8NCQ7 364 aaPredicted RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 OR2W6PQ8NHA6 318 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 DEPTORQ8TB45 409 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 LRRC8CQ8TDW0 803 aa8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 DNAJC17Q9NVM6 304 aaKnown RBP8.85□□□□□ -0.99
PRKAB1-207ENST00000542698 GOLGA8IPA6NC78 632 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 GOLGA8JA6NMD2 632 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 SLC37A4O43826 429 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 ABL1P00519 1130 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 CHRNA3P32297 505 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 BYSLQ13895 437 aaKnown RBP8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 NBPF9Q3BBW0 867 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 LGSNQ5TDP6 509 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 TXNRD3Q86VQ6 643 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 KSR1Q8IVT5 923 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 XXYLT1Q8NBI6 393 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 SLC17A8Q8NDX2 589 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 SUPT20HQ8NEM7 779 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 EIF2AK1Q9BQI3 630 aaKnown RBP8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 ISCUQ9H1K1 167 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 GPR75-ASB3A0A0A6YYF3 556 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 H0YCG3 227 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 EVI5O60447 810 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 ALCAMQ13740 583 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 GBP7Q8N8V2 638 aaPredicted RBP8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 KIAA0895Q8NCT3 520 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 HDAC7Q8WUI4 952 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 SREK1Q8WXA9 508 aaKnown RBP8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 RSAD2Q8WXG1 361 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 TRIM11Q96F44 468 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 DYDC2Q96IM9 177 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 JMJD4Q9H9V9 463 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 IL17RBQ9NRM6 502 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 NAGPAQ9UK23 515 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 PITPNM2Q9BZ72 1349 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 EYA4O95677 639 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 NMT1P30419 496 aaKnown RBP8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 PHBP35232 272 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 PBX1P40424 430 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 CRKP46108 304 aa8.84□□□□□ -0.99
PRKAB1-207ENST00000542698 ITIH3Q06033 890 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms