RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 RPL13P26373 211 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 ARFIP2P53365 341 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 MTTPP55157 894 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 THOC5Q13769 683 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 TMEM259Q4ZIN3 620 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 LGSNQ5TDP6 509 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 CCDC124Q96CT7 223 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 MYO5BQ9ULV0 1848 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 TRIM49BA6NDI0 452 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 SNAP23O00161 211 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 HNRNPCL1O60812 293 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 SMNDC1O75940 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 SLC5A1P13866 664 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 DSG1Q02413 1049 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 NR5A1Q13285 461 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 KRT81Q14533 505 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 TRIP10Q15642 601 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 CASKIN2Q8WXE0 1202 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 FNBP1Q96RU3 617 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 CAPN11Q9UMQ6 739 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 PCDHB6Q9Y5E3 794 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 SRPRBQ9Y5M8 271 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 ATP6V1C1P21283 382 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 PTPREP23469 700 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 C16orf72Q14CZ0 275 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 PALM2Q8IXS6 379 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 SNX29Q8TEQ0 813 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 DHTKD1Q96HY7 919 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 C10orf88Q9H8K7 445 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 DKK3Q9UBP4 350 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 LIMA1Q9UHB6 759 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 SPATA31D1Q6ZQQ2 1576 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 TMEM120BA0PK00 339 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 DNM1LO00429 736 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ESRRBO95718 433 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 USP46P62068 366 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 CNGA3Q16281 694 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 TRIM16LQ309B1 348 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 PATL1Q86TB9 770 aaKnown RBP11.81□□□□□ -0.52
ERBB2-204ENST00000541774 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.81□□□□□ -0.52
ERBB2-204ENST00000541774 SCG3Q8WXD2 468 aaKnown RBP11.81□□□□□ -0.52
ERBB2-204ENST00000541774 TATDN2Q93075 761 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 COQ7Q99807 217 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ISCUQ9H1K1 167 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 CCPG1Q9ULG6 757 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ANKARQ7Z5J8 1434 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 LOC102724428A0A0B4J2F2 783 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 CCDC159P0C7I6 412 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 SIK1P57059 783 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ASPHQ12797 758 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 MAN2A1Q16706 1144 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ZNF554Q86TJ5 538 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 CABP7Q86V35 215 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ABCF3Q9NUQ8 709 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 TMOD4Q9NZQ9 345 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ZNF229Q9UJW7 825 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 ANAPC5Q9UJX4 755 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 SMAPO00193 183 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 LCA5LO95447 670 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 SERPING1P05155 500 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 GJC2Q5T442 439 aaPredicted RBP11.81□□□□□ -0.52
ERBB2-204ENST00000541774 STXBP4Q6ZWJ1 553 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 JDP2Q8WYK2 163 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 SH3GL2Q99962 352 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 NDST4Q9H3R1 872 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 GID8Q9NWU2 228 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 DUSP10Q9Y6W6 482 aa11.81□□□□□ -0.52
ERBB2-204ENST00000541774 SFI1A8K8P3 1242 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 ASAP2O43150 1006 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 TTI1O43156 1089 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 CALM1P0DP23 149 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 CALM2P0DP24 149 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 CALM3P0DP25 149 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 FGFR4P22455 802 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 PPP2R5CQ13362 524 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 HERC4Q5GLZ8 1057 aaPredicted RBP11.8□□□□□ -0.52
ERBB2-204ENST00000541774 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 IZUMO2Q6UXV1 221 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 PPP4R1Q8TF05 950 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 GRK7Q8WTQ7 553 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 APPBP2Q92624 585 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 CRNKL1Q9BZJ0 848 aaKnown RBP11.8□□□□□ -0.52
ERBB2-204ENST00000541774 COMMD3-BMI1R4GMX3 469 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 PPLO60437 1756 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 CD163L1Q9NR16 1453 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 ITIH6Q6UXX5 1313 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 STRNO43815 780 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 CLPTM1O96005 669 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 GLI1P08151 1106 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 NAPAP54920 295 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 MAP3K7CLP57077 242 aa11.8□□□□□ -0.52
ERBB2-204ENST00000541774 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms